BPPCT011, BPPCT011 (genetic_marker) Prunus persica | GDR

Marker Overview

Marker Overview


Name	BPPCT011
Genbank ID	N/A
Type	SSR
Species	Prunus persica
Germplasm	OHenry
Source Type	Genomic DNA
Repeat Motif	(CT)16
PCR Condition	94 C 1 min, 94 C 45 sec, 57 C 45 sec, 72 C 2 min. 35 cycles, 72 C 4min
Primer 1	BPPCT011.F primer: TCTGAGGGCTAGAGTGGGC
Primer 2	BPPCT011.R primer: TGTTTCAGGAGTCGAACAGC
Product Length	172
Publication	[view all]
Contact	E. Dirlewanger

Contact

Name

Details

E. Dirlewanger

First name:	Elisabeth
Last name:	Dirlewanger
Institution:	INRA
Address:	Unite de Recherche sur les Especes Fruitieres et la Vigne, Centre de Bordeaux, BP 81, 33883 Villenave d Ornon cedex, France
Country:	France
Email:	dirlewan@bordeaux.inra.fr

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
scaffold_1	supercontig	scaffold_1:39665683..39665683 .	Prunus persica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
GDR Markers Database	2004-01-01

Publications


Year	Publication
2002	Dirlewanger E, Cosson P, Tavaud M, Aranzana J, Poizat C, Zanetto A, Arús P, Laigret F. Development of microsatellite markers in peach [ Prunus persica (L.) Batsch] and their use in genetic diversity analysis in peach and sweet cherry ( Prunus avium L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2002 Jul; 105(1):127-138.

Germplasm


Stock Name	Type
OHenry	accession

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Almond-RD-F1	G1	N/A	58.8	BPPCT011	View
2	Apricot-HAxRM-F1	G1	N/A	135.3	BPPCT011	View
3	Peach-PF-BC1-2005	G1	N/A	112.3	BPPCT011	View
4	Sweet Cherry-PAxPN-94	G1	N/A	113.3	nBPPCT011	View
5	Sweet Cherry-47	G1	N/A	109.4	nBPPCT011	View