BPPCT013, BPPCT013 (genetic_marker) Prunus persica

Marker Overview
NameBPPCT013
Genbank IDAF374940
TypeSSR
SpeciesPrunus persica
GermplasmOHenry
Source TypeGenomic DNA
Repeat Motif(AG)28
PCR Condition94 C 1 min, 94 C 45 sec, 57 C 45 sec, 72 C 2 min. 35 cycles, 72 C 4min
Primer 1BPPCT013.F primer: ACCCACAAATCAAGCATATCC
Primer 2BPPCT013.R primer: AGCTTCAGCCACCAAGC
Product Length183
PolymorphismP_ BPPCT013
Publication[view all]
ContactE. Dirlewanger
Amy Iezzoni
Contact
NameDetails
E. Dirlewanger
First name:Elisabeth
Last name:Dirlewanger
Institution:INRA
Address:Unite de Recherche sur les Especes Fruitieres et la Vigne, Centre de Bordeaux, BP 81, 33883 Villenave d Ornon cedex, France
Country:France
Email:dirlewan@bordeaux.inra.fr
Amy Iezzoni
First name:Amy
Last name:Iezzoni
Title:Professor
Institution:Michigan State University
Address:A342 PSSB, East Lansing, MI 48824
Country:USA
Email:iezzoni@msu.edu
Phone:517-355-5191 x1391
Keywords:cherry breeder
Last update:Jun 2017
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
GDR Markers Database2004-01-01
Alignment of genetic markers to Prunus persics v2.02019-04-11
Germplasm
Stock NameType
OHenryaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Almond-NL-F1-2010G2N/A26.98BPPCT013View
2Apricot-LB-F1G2N/A34.9BPPCT013View
3Apricot-GM-F1G2N/A43.5BPPCT013View
4Peach-DG-F1-2009G2N/A41.4BPPCT013View
5Sweet Cherry-EFxNY-F1-2008EF4N/A84.47BPPCT013View
6Prunus-TE-F2G2N/A25BPPCT013View
7Chokecherry-RCxSC-F1-2014RC XIVaN/A8.4BPPCT013View
8Chokecherry-RCxSC-F1-2017Cho-14N/A59.96BPPCT013View
9Prunus-TxE-peachV2.0LG2N/A25BPPCT013View
10Sweet Cherry-C-303xBeniyutaka-F1Pa4N/A65.2BPPCT013View
11Sweet Cherry-PAV_r1.0_consensus_map-F1Pa4N/A98.34BPPCT013View
12Sweet Cherry-PAxPN-94G4N/A78.5BPPCT013View
13Peach-DG-F1-2009G2N/A0bppct013-cView
14Sweet Cherry-PAxPN-94G2N/A54.3nBPPCT013AView
15Sweet Cherry-47G2N/A63.6nBPPCT013AView
Alignments
Feature NameTypeLocationAnalysis
scaffold_2 supercontig scaffold_2:17931601..17932334. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp02 chromosome Pp02:21507880..21508613+ Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)