BPPCT038, BPPCT038 (genetic_marker) Prunus persica

Marker Overview
NameBPPCT038
Genbank IDN/A
TypeSSR
SpeciesPrunus persica
GermplasmOHenry
Source TypeGenomic DNA
genomic
Repeat Motif(GA)25
PCR Condition94 C 1 min, 94 C 45 sec, 57 C 45 sec, 72 C 2 min. 35 cycles, 72 C 4min
Primer 1BPPCT038.F primer: TATATTGTTGGCTTCTTGCATG
Primer 2BPPCT038.R primer: TGAAAGTGAAACAATGGAAGC
Product Length135
PolymorphismP_ BPPCT038
Publication[view all]
ContactE. Dirlewanger
Contact
NameDetails
E. Dirlewanger
First name:Elisabeth
Last name:Dirlewanger
Institution:INRA
Address:Unite de Recherche sur les Especes Fruitieres et la Vigne, Centre de Bordeaux, BP 81, 33883 Villenave d Ornon cedex, France
Country:France
Email:dirlewan@bordeaux.inra.fr
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
GDR Markers Database2004-01-01
Germplasm
Stock NameType
OHenryaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Peach-JF-F2G5N/A73BPPCT038View
2Prunus-TE-F2G5N/A32.9BPPCT038View
3Peach-ScB-F2-2007G5N/A47.6BPPCT038View
4Peach-AJ-F2-2005G5N/A48.4BPPCT038View
5Peach-PF-BC1-2005G5N/A50.2BPPCT038View
6Peach-AJ-F2G5N/A48.4BPPCT038View
7Peach-CF-F2-20145N/A0BPPCT038View
8Flowering Cherry-CYxE750-F1-CY5N/A38.2BPPCT038View
9Peach-LAxFG-F2LG5N/A39.3BPPCT038View
10Peach-PIxSL-F2LG5N/A39.6BPPCT038View
11Peach-HU-F2G5N/A37.2BPPCT038View
12Apricot-BC-F1-2016B5N/A27.5BPPCT038View
13Apricot-BC-F1-2016C5N/A30.5BPPCT038View
14Apricot-GC-F1-2016G5N/A19.5BPPCT038View
15Apricot-GC-F1-2016C5N/A33.3BPPCT038View
16Peach-BN-F1LG5_BbN/A4.3BPPCT038View
17Peach-JF-F2-2016LG5.2N/A54.3BPPCT038View
18Prunus-TxE-peachV2.0LG5N/A32.9BPPCT038View
19Sweet Cherry-PAxPN-94G5N/A43.7BPPCT038View
20Sweet Cherry-47G5N/A42.4BPPCT038View
Alignments
Feature NameTypeLocationAnalysis
scaffold_5 supercontig scaffold_5:14658198..14658198. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp05 chromosome Pp05:14652909..14653035. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)