CPDCT022 (genetic_marker) Prunus dulcis | GDR

Marker Overview

Marker Overview


Name	CPDCT022
Genbank ID	AY862459
Type	SSR
Species	Prunus dulcis
Repeat Motif	(CT)17
PCR Condition	62
Primer 1	CPDCT022.Forward Primer: TGATCGGCGTCTCCTTTATC
Primer 2	CPDCT022.Reverse Primer: AAAGCAAGCAGGCAAATGAA
Product Length	152
Publication	[view all]
Contact	P. Arus Amy Iezzoni Maria Badenes

Contact

Name

Details

P. Arus

First name:	Pere
Last name:	Arus
Institution:	IRTA
Address:	Institut de Recerca I Tecnologia Agroalimentaries (IRTA), Departament de Genetica Vegetal, Carretera de Cabrils s/n, 08348 Cabrils, Spain
Email:	pere.arus@irta.es

Amy Iezzoni

First name:	Amy
Last name:	Iezzoni
Title:	Professor
Institution:	Michigan State University
Address:	A342 PSSB, East Lansing, MI 48824
Country:	USA
Email:	iezzoni@msu.edu
Phone:	517-355-5191 x1391
Keywords:	cherry breeder
Last update:	Jun 2017

Maria Badenes

First name:	Maria
Last name:	Badenes
Institution:	Instituto Valenciano de Investigaciones Agrarias (IVIA)
Address:	Instituto Valenciano de Investigaciones Agrarias, Apartado Oficial 46113 Moncada, Valencia, Spain
Country:	Spain
Email:	badenes_mlu@gva.es

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Pd05	chromosome	Pd05:16073201..16073352 .	Prunus dulcis Lauranne Genome v1.0	GDR marker alignment to genome using primer sequences

Publications


Year	Publication
2008	Olmstead JW, Sebolt AM, Cabrera A, Sooriyapathirana SS, Hammar S, Iriarte G, Wang D, Chen CY, van der Knaap E, Iezzoni AF. Construction of an intra-specific sweet cherry (Prunus avium L.) genetic linkage map and synteny analysis with the Prunus reference map. Tree Genetics and Genomes. 2008; 4(4):897-910.
2005	Molecular ecology notes. 2005 Sept., v. 5, no. 3 p. 531-535. 1022686504ISSN 1471-8278

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Peach-JF-F2	G5	N/A	94.4	CPDCT022	View
2	Sweet Cherry-EFxNY-F1-2008	EF5	N/A	83.49	CPDCT022	View
3	Sweet Cherry-EFxNY-F1-2008	NY5	N/A	18.3	CPDCT022	View
4	Sweet Cherry-PAxPN-94	G5	N/A	49	CPDCT022	View
5	Sweet Cherry-47	G5	N/A	47.8	CPDCT022	View