CPPCT027, CPPCT027 (genetic_marker) Prunus persica

Marker Overview
NameCPPCT027
Genbank IDN/A
TypeSSR
SpeciesPrunus persica
Source TypeGenomic DNA
genomic
Repeat Motif(CT)30
PCR Condition94 C 1 min, 94 C 30 sec, 55 C 30 sec, 72 C 1 min. 34 cycles, 72 C 5min
Primer 1CPPCT027.Forward Primer: GAGCAGTTCATAAGTTGGAACAACGATAAAGATTTTGACTGCATGA
Primer 2CPPCT027.primer 1: GAGCAGTTCATAAGTTGGAACAACGATAAAGATTTTGACTGCATGA
Product Length114
Publication[view all]
ContactE. Dirlewanger
Maria Badenes
Contact
NameDetails
E. Dirlewanger
First name:Elisabeth
Last name:Dirlewanger
Institution:INRA
Address:Unite de Recherche sur les Especes Fruitieres et la Vigne, Centre de Bordeaux, BP 81, 33883 Villenave d Ornon cedex, France
Country:France
Email:dirlewan@bordeaux.inra.fr
Maria Badenes
First name:Maria 
Last name:Badenes
Institution:Instituto Valenciano de Investigaciones Agrarias (IVIA)
Address:Instituto Valenciano de Investigaciones Agrarias, Apartado Oficial 46113 Moncada, Valencia, Spain
Country:Spain
Email:badenes_mlu@gva.es
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
GDR Markers Database2004-01-01
Alignment of genetic markers to Prunus persics v2.02019-04-11
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-F2G1N/A23.1CPPCT027View
2Peach-DG-F1-2009G1N/A56.6CPPCT027View
3Peach-AJ-F2-2005G1N/A19.8CPPCT027View
4Peach-AJ-F2G1N/A19.8CPPCT027View
5Peach-CF-F2-20141N/A38.01CPPCT027View
6Flowering Cherry-CYxE750-F1-CY1N/A28.1CPPCT027View
7Apricot-LL-F2-Lito-2011LG1N/A34.6CPPCT027View
8Prunus-TE-F2-20151N/A19.2CPPCT027View
9Peach-DvsS-BC2LG1N/A38CPPCT027View
10Prunus-TxE-peachV2.0LG1N/A23.1CPPCT027View
11Sweet Cherry-C-303xBeniyutaka-F1Pa1N/A48.82CPPCT027View
12Sweet Cherry-C-303xBenikirari-F1Pa1N/A52.72CPPCT027View
13Sweet Cherry-PAV_r1.0_consensus_map-F1Pa1N/A61.67CPPCT027View
14Peach-CF-F2G1N/A27.8CPPCT027View
15Chokecherry-RCxSC-F1-2014SC IVbN/A4.5CPPCT27-1View
16Chokecherry-RCxSC-F1-2017Cho-15N/A28.94CPPCT27-1View
17Sweet Cherry-PAxPN-94G1N/A33.8nCPPCT027View
18Sweet Cherry-47G1N/A34.4nCPPCT027View
19Peach_Consensus_map_20181N/A31.2CPPCT027View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:12409317..12409665. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:12857545..12857893+ Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)