CPSCT024, CPSCT024 (genetic_marker) Prunus salicina

Marker Overview
NameCPSCT024
Genbank IDAY426209
TypeSSR
SpeciesPrunus salicina
GermplasmSanta Rosa
Source Typegenomic DNA
Repeat Motif(GA)20
PCR Condition94 C 1 min, 94 C 30 sec, 46 C 30 sec, 72 C 30 sec. 35 cycles, 72 C 5min
Primer 1CPSCT024.F primer: TGGGTCGTCTTCTTTATCGTG
Primer 2CPSCT024.Forward Primer: TGGGTCGTCTTCTTTATCGTG
Primer 3CPSCT024.R primer: CCTCACCAAAACGGTAGTCAG
Primer 4CPSCT024.Reverse Primer: CCTCACCAAAACGGTAGTCAG
Product Length176
Publication[view all]
ContactP. Arus
Maria Badenes
Contact
NameDetails
P. Arus
First name:Pere
Last name:Arus
Institution:IRTA
Address:Institut de Recerca I Tecnologia Agroalimentaries (IRTA), Departament de Genetica Vegetal, Carretera de Cabrils s/n, 08348 Cabrils, Spain
Email:pere.arus@irta.es
Maria Badenes
First name:Maria 
Last name:Badenes
Institution:Instituto Valenciano de Investigaciones Agrarias (IVIA)
Address:Instituto Valenciano de Investigaciones Agrarias, Apartado Oficial 46113 Moncada, Valencia, Spain
Country:Spain
Email:badenes_mlu@gva.es
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
GDR Markers Database2004-01-01
Alignment of genetic markers to Prunus persics v2.02019-04-11
Germplasm
Stock NameType
Santa Rosaaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Almond-NL-F1-2010G1N/A36.1CPSCT024View
2Prunus-TE-F2G1N/A36.6CPSCT024View
3Apricot-LL-F2-Lito-2011LG1N/A48CPSCT024View
4Apricot-integrated-Goldrich-2011LG1N/A42.7CPSCT024View
5Prunus-TxE-peachV2.0LG1N/A36.6CPSCT024View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:27083599..27084298. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:28058204..28058903+ Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)