EPDCU3117, EPDCU3117 (genetic_marker) Prunus dulcis

Marker Overview
NameEPDCU3117
Genbank IDBU573117
TypeSSR
SpeciesPrunus dulcis
GermplasmNonpareil
Repeat MotifAGG
PCR Condition94 C 2 min, 94 C 25 sec, 57 C 20 sec, 72 C 20 sec. 35 cycles, 72 C 5 min
Primer 1EPDCU3117.F primer: CAGAGGGAACAGTGTGAGCA
Primer 2EPDCU3117.R primer: TGTTGTTGTCGACCCTGAAA
Primer 3EPDCU3117.forward primer: CAGAGGGAACAGTGTGAGCA
Primer 4EPDCU3117.revers primer: TGTTGTTGTCGACCCTGAAA
Product Length164
Publication[view all]
ContactW. Howad
Ignazio Verde
Contact
NameDetails
W. Howad
First name:Werner
Last name:Howad
Institution:IRTA
Address:Institut de Recerca I Tecnologia Agroalimentaries (IRTA), Departament de Genetica Vegetal, Carretera de Cabrils s/n, 08348 Cabrils, Spain
Email:werner.howad@irta.es
Ignazio Verde
First name:Ignazio
Last name:Verde
Title:researcher
Institution:Istituto Sperimentale per la Frutticoltura (CRA)
Address:Via di Fioranello 52, Ciampino Aeroporto, 00040 Rome, Italy
Country:Italy
Email:ignazio.verde@entecra.it
Phone:(+39) 0679348183
Fax:(+39) 0679341630
Keywords:Peach
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
GDR Markers Database2004-01-01
Alignment of genetic markers to Prunus persics v2.02019-04-11
Germplasm
Stock NameType
Nonpareilaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Peach-LAxFG-F2LG6N/A129.5EPDCU3117View
2Peach-DvsS-BC2LG8N/A25EPDCU3117View
3Prunus-TE-F2-20158N/A49.7EPDCU3117View
4Prunus-TE-BC1-T1EG8_T1EN/A43.4EPDCU3117View
5Prunus-TxE-peachV2.0LG8N/A54.7EPDCU3117View
6Peach_Consensus_map_20188N/A54.25EPDCU3117View
Alignments
Feature NameTypeLocationAnalysis
scaffold_8 supercontig scaffold_8:20218634..20219399. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp08 chromosome Pp08:20963088..20963853+ Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)