SNP_IGA_349789, SNP_IGA_349789 (genetic_marker) Prunus persica

Marker Overview
NameSNP_IGA_349789
dbSNP IDN/A
SNP Array ID
IRSC 9K SNP array for peach:SNP_IGA_349789
IRSC 16K SNP array for peach:SNP_IGA_349789
3K SeqSNP for peach:SNP_IGA_349789
TypeSNP
SNP Alleles[A/C]
SpeciesPrunus persica
Primer 1SNP_IGA_349789_LEFT_primer_0: GCTCTACTACAGGGTTCGCAGT
Primer 2SNP_IGA_349789_RIGHT_primer_0: CTAGAAGCCTGCCTCCAAGTTA
Product Length187
ContactKsenija Gasic
Contact
NameDetails
Ksenija Gasic
Description:fruit quality, abiotic and biotic tolerance /resistance
First name:Ksenija
Last name:Gasic
Title:Assistant professor
Institution:Clemson University
Address:112 BRC/ 51 New Cherry Rd, Clemson Sc 29634
Country:USA
Email:kgasic@clemson.edu
Phone:864.656.3664.
Fax:864-656-4960
Keywords:Traditional and molecular plant breeding
Libraries
Library NameType
IRSC 9K SNP array for peachSNP_chip
IRSC 16K SNP array for peachSNP_chip
3K SeqSNP for peachSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC SNP array 9K to Peach Genome v2.0.a12016-11-21
Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)2015-01-15
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Peach-OC-F23N/A49.6SNP_IGA_349789View
2peach-ZC-F23N/A52.33SNP_IGA_349789View
3Peach-PF-BC1-2017LG3N/A42.6SNP_IGA_349789View
4Peach-PF-F1-2017LG3N/A43.8SNP_IGA_349789View
5Peach-ZC-F2-20183N/A46.85SNP_IGA_349789View
6Peach_Consensus_map_20183N/A34.81SNP_IGA_349789View
Sequence
>SNP_IGA_349789 ID=SNP_IGA_349789; Name=SNP_IGA_349789; organism=Prunus persica; type=genetic_marker; length=121bp
TGTACAGGTCTACATTCTCCTTCATGATATCCTCACGCTAGATGCCCAAA
CTATGCTGCGMAACTATTTGCAGGTACATGAAAAATGTCAATTTATAACT
TGGAGGCAGGCTTCTAGCCTT