ssrPaCITA12 (genetic_marker) Prunus armeniaca | GDR

Marker Overview

Marker Overview


Name	ssrPaCITA12
Genbank ID	AF324922
Type	SSR
Species	Prunus armeniaca
Repeat Motif	(TC)16
Primer 1	ssrPaCITA12.Forward Primer: GAGACACCCCAACCACCCATCATGTGGTGTTGGAAATGTGGAAAGAAATG
Publication	[view all]
Contact	A. Da Camara Machado Maria Badenes

Contact

Name

Details

A. Da Camara Machado

First name:	Artur
Last name:	Da Camara Machado
Institution:	Universidade dos Acores, Portugal
Address:	Universidade dos Acores, Departamento de Ciencias Agrarias, Terra-Chz, 9701851 Angra do Heroismo, Portugal
Email:	amachado@angra.uac.pt

Maria Badenes

First name:	Maria
Last name:	Badenes
Institution:	Instituto Valenciano de Investigaciones Agrarias (IVIA)
Address:	Instituto Valenciano de Investigaciones Agrarias, Apartado Oficial 46113 Moncada, Valencia, Spain
Country:	Spain
Email:	badenes_mlu@gva.es

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
PAV06_REGINA	chromosome	PAV06_REGINA:33049800..33049946 .	Prunus avium Regina Genome v1.0 Assembly & Annotation	GDR marker alignment to genome using primer sequences
chr_6	chromosome	chr_6:36494731..36494878 .	Prunus avium Tieton Genome v2.0 Assembly & Annotation	GDR marker alignment to genome using primer sequences

Publications


Year	Publication
2002	Mol Ecol Notes, 2: 24-26

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Peach-HU-F2	G6	N/A	65.3	ssrPaCITA12	View
2	Peach-CA-BC1-2017	LG6	N/A	78.6	ssrPaCITA12	View
3	Peach-CF-F2	G6	N/A	53	ssrPaCITA12	View