UDF003 (genetic_marker) Fragaria vesca

Marker Overview
NameUDF003
Genbank IDBV097100
TypeSSR
SpeciesFragaria vesca
GermplasmIlaria
Source Typegenomic clone
Repeat MotifAC
17mer
PCR ConditionFinal reaction volume of 12.5ul comprising 1.5ul template DNA, 1x PCR buffer, 1.5mM Mg2+, 200 M dNTPs, 0.2uM each primer and 0.25U Taq polymerase. PCR cycles: initial denaturation step of 94oC (2min), then 10 cycles of 94oC (30s), 55-50oC annealing temperature decreasing by 0.5oC per cycle (45s) and 72oC (1min), followed by 25 cycles of 94oC (30s), 50oC (45s) and 72oC (1min), and a final elongation step of 72oC (5min)
Primer 1UDF003.Forward: ATAAGTGGCCAACCAATCCA
Primer 2UDF003.Reverse (no gttt): TTCAAAAGTGTAGTGCTGAAATCAC
Primer 3UDF003.UDF003F: ATAAGTGGCCAACCAATCCA
Primer 4UDF003.UDF003R: TTCAAAAGTGTAGTGCTGAAATCAC
Publication[view all]
ContactD. Sargent
Eric van de Weg
Contact
NameDetails
D. Sargent
First name:Dan
Last name:Sargent
Institution:East Malling Research
Address:New Road, East Malling, Kent ME19 6BJ, UK
Email:dan.sargent@emr.ac.uk
Phone:+44 1732 523747
Eric van de Weg
First name:Eric
Last name:van de Weg
Title:researcher
Institution:Wageningen-UR Plant Breeding, Wageningen University and Research Centre
Address:P.O. Box 16, 6700 AA Wageningen, The Netherlands
Country:The Netherlands
Email:eric.vandeweg@wur.nl
Keywords:allo-octoploid strawberry
Germplasm
Stock NameType
Ilariaaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Fragaria-FVxFN-F2-2010FG5N/A59.34UDF003View
2Strawberry-HK-F1LG5AN/A52.2UDF003View
3Strawberry-HK-F1LG5BN/A54.5UDF003View
4Strawberry-HK-F1LG5CN/A56.2UDF003View
5Strawberry-HK-F1LG5DN/A56.8UDF003View