RosBREED_snp_tart_cherry_a_Pp1_35808974, RosBREED_snp_tart_cherry_a_Pp1_35808974 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_a_Pp1_35808974
dbSNP IDss490546690
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_a_Pp1_35808974
TypeSNP
SNP AllelesT/C
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A54.28RosBREED_snp_tart_cherry_a_Pp1_35808974View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A136.66RosBREED_snp_tart_cherry_a_Pp1_35808974View
3SourCherry-Montx25-F1LG1N/A110.84RosBREED_snp_tart_cherry_a_Pp1_35808974View
4SourCherry-25x25-F1LG1N/A110.84RosBREED_snp_tart_cherry_a_Pp1_35808974View
5Sour Cherry-US-F1LG1N/A110.84RosBREED_snp_tart_cherry_a_Pp1_35808974View
Sequence
>RosBREED_snp_tart_cherry_a_Pp1_35808974 ID=RosBREED_snp_tart_cherry_a_Pp1_35808974; Name=RosBREED_snp_tart_cherry_a_Pp1_35808974; organism=Prunus cerasus; type=genetic_marker; length=207bp
CATTCTGCTTTGCGCCAGATTACAACTTGATTGACCTTTGTGTTGGATTT
CTGGGAAGCAGCTGGTTCTATATTATCATTCAGCAAATACACTTCAGCTA
G[T/C]GCAGATCAAAACTGAGTAAGCTGTGATGCAGGGTATGGTCTAGT
GGTGAACCAAATGAGCTGACCCAAAGGGTAGCACTTAAGCAGACTGATGC
TGTAAAC
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:35808974..35808974. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:36782186..36782186. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:31819919..31819919. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)