RosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1, RosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1
dbSNP IDss475876716
SNP Array ID
480K SNP array for apple:AX-115182729
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1
20K SNP array for apple:RosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1
50K SNP array for apple:AX-105192538
TypeSNP
SNP AllelesA/C
Probe 1RosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1.probe: TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACTCATAGCCA
5' Flanking SequenceTCTCTCTGCGTTTGCTTGGGGAAGACATGGTTCTGGTGTCAAGTCAATTTCTGTGTTCTT C
3' Flanking SequenceTGGCTATGAGTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGAGTT T
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-MM-F11N/A8.7a475876716View
2Apple-BB-F11N/A15.88RosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1View
3Apple-NC-F11N/A27.49RosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1View
4Apple-NCZFBB-consensus1N/A15.42RosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1View
5Apple-ZF-F11N/A13.25RosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1View
Sequence
>RosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1 ID=RosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1; Name=RosBREEDSNP_SNP_GT_12392481_Lg1_02334_MAF40_1680740_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
ATGGTTCTGGTGTCAAGTCAATTTCTGTGTTCTTC[G/T]TGGCTATGAG
TTGAGAGAGAGAGAGAGAGAGAGAG