RosBREEDSNP_SNP_AG_2288311_Lg7_01946_MAF50_MDP0000280243_exon9, RosBREEDSNP_SNP_AG_2288311_Lg7_01946_MAF50_MDP0000280243_exon9 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_AG_2288311_Lg7_01946_MAF50_MDP0000280243_exon9

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:	RosBREEDSNP_SNP_AG_2288311_Lg7_01946_MAF50_MDP0000280243_exon9
50K SNP array for apple:	AX-105175478

Type

SNP

SNP Alleles

A/G

5' Flanking Sequence

AATTTCCCTTTGGATCCCAGCTGGAGAAGGTTGTC

3' Flanking Sequence

TGGGTTGGATTTGGACGAGAGAAGCTGTCGCGTG

Species

Malus x domestica

Publication

[view all]

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip
50K SNP array for apple	SNP_chip

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2020	Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8

Sequence

>RosBREEDSNP_SNP_AG_2288311_Lg7_01946_MAF50_MDP0000280243_exon9 ID=RosBREEDSNP_SNP_AG_2288311_Lg7_01946_MAF50_MDP0000280243_exon9; Name=RosBREEDSNP_SNP_AG_2288311_Lg7_01946_MAF50_MDP0000280243_exon9; organism=Malus x domestica; type=genetic_marker; length=70bp
AATTTCCCTTTGGATCCCAGCTGGAGAAGGTTGTCRTGGGTTGGATTTGG
ACGAGAGAAGCTGTCGCGTG

Alignments

Feature Name	Type	Location	Analysis
MDC007078.473	contig	MDC007078.473:3210..3210.	Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr07	chromosome	Chr07:2303299..2303299.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation