RosBREEDSNP_SNP_TC_34931425_Lg10_00258_MAF50_190309_exon1, RosBREEDSNP_SNP_TC_34931425_Lg10_00258_MAF50_190309_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_34931425_Lg10_00258_MAF50_190309_exon1
dbSNP IDss475879963
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_34931425_Lg10_00258_MAF50_190309_exon1
50K SNP array for apple:AX-105224014
TypeSNP
SNP AllelesT/C
5' Flanking SequenceAAACTGGGCCGCGGACCTCATCACAGTCATTGAAG
3' Flanking SequenceCGGCACGACTTCTGCGACGATGACCTCCATCACC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Pear-PH-CG-2017LG8N/A79.61RosBREEDSNP_SNP_TC_34931425_Lg10_00258_MAF50_190309_exon1View
Sequence
>RosBREEDSNP_SNP_TC_34931425_Lg10_00258_MAF50_190309_exon1 ID=RosBREEDSNP_SNP_TC_34931425_Lg10_00258_MAF50_190309_exon1; Name=RosBREEDSNP_SNP_TC_34931425_Lg10_00258_MAF50_190309_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
AAACTGGGCCGCGGACCTCATCACAGTCATTGAAGYCGGCACGACTTCTG
CGACGATGACCTCCATCACC
Alignments
Feature NameTypeLocationAnalysis
MDC020582.252 contig MDC020582.252:6380..6380. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr00 chromosome Chr00:4071469..4071469. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr08 chromosome Chr08:3658860..3658860. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr15 chromosome Chr15:19697420..19697420. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation