RosBREEDSNP_SNP_GT_32820549_Lg8_01182_MAF10_1630387_exon2, RosBREEDSNP_SNP_GT_32820549_Lg8_01182_MAF10_1630387_exon2 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_GT_32820549_Lg8_01182_MAF10_1630387_exon2

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:	RosBREEDSNP_SNP_GT_32820549_Lg8_01182_MAF10_1630387_exon2
50K SNP array for apple:	AX-105224300

Type

SNP

SNP Alleles

T/G

5' Flanking Sequence

ACCACATACTCCTCATTTTGGCTGTGTACAGCAAT

3' Flanking Sequence

GTAGGAAATAAGGGGCCCTTGATATCCTTGGGCA

Species

Malus x domestica

Publication

[view all]

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip
50K SNP array for apple	SNP_chip

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2020	Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8

Sequence

>RosBREEDSNP_SNP_GT_32820549_Lg8_01182_MAF10_1630387_exon2 ID=RosBREEDSNP_SNP_GT_32820549_Lg8_01182_MAF10_1630387_exon2; Name=RosBREEDSNP_SNP_GT_32820549_Lg8_01182_MAF10_1630387_exon2; organism=Malus x domestica; type=genetic_marker; length=70bp
ACCACATACTCCTCATTTTGGCTGTGTACAGCAATKGTAGGAAATAAGGG
GCCCTTGATATCCTTGGGCA

Alignments

Feature Name	Type	Location	Analysis
MDC015891.57	contig	MDC015891.57:5014..5014.	Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr08	chromosome	Chr08:28295384..28295384.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation