RosBREEDSNP_SNP_TG_6128721_Lg1_MDP0000375685__MDP0000375685_exon1, RosBREEDSNP_SNP_TG_6128721_Lg1_MDP0000375685__MDP0000375685_exon1 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_TG_6128721_Lg1_MDP0000375685__MDP0000375685_exon1

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:	RosBREEDSNP_SNP_TG_6128721_Lg1_MDP0000375685__MDP0000375685_exon1
50K SNP array for apple:	AX-105210635

Type

SNP

SNP Alleles

T/G

5' Flanking Sequence

CTGGTTTTTTCAACCAAAACCTTTATAACTGGCCA

3' Flanking Sequence

AGCTACCAGTAGTGCTAGTGGCTAATTATCAAAC

Species

Malus x domestica

Publication

[view all]

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip
50K SNP array for apple	SNP_chip

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2020	Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8

Sequence

>RosBREEDSNP_SNP_TG_6128721_Lg1_MDP0000375685__MDP0000375685_exon1 ID=RosBREEDSNP_SNP_TG_6128721_Lg1_MDP0000375685__MDP0000375685_exon1; Name=RosBREEDSNP_SNP_TG_6128721_Lg1_MDP0000375685__MDP0000375685_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
CTGGTTTTTTCAACCAAAACCTTTATAACTGGCCAKAGCTACCAGTAGTG
CTAGTGGCTAATTATCAAAC

Alignments

Feature Name	Type	Location	Analysis
MDC020979.160	contig	MDC020979.160:11610..11610.	Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr17	chromosome	Chr17:13395853..13395853.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr17	chromosome	Chr17:13395851..13395851.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation