RosBREEDSNP_SNP_GA_6749317_Lg9_00280_MAF40_596961_exon1, RosBREEDSNP_SNP_GA_6749317_Lg9_00280_MAF40_596961_exon1 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_GA_6749317_Lg9_00280_MAF40_596961_exon1

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:	RosBREEDSNP_SNP_GA_6749317_Lg9_00280_MAF40_596961_exon1
50K SNP array for apple:	AX-105224338

Type

SNP

SNP Alleles

A/G

5' Flanking Sequence

GTGGAGTCCGAAAAAAGTGAACTGGGATTGGATAA

3' Flanking Sequence

GGTGCTAACAGTGCAACTAAGGAAGCTGAGAATG

Species

Malus x domestica

Publication

[view all]

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip
50K SNP array for apple	SNP_chip

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2020	Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8

Sequence

>RosBREEDSNP_SNP_GA_6749317_Lg9_00280_MAF40_596961_exon1 ID=RosBREEDSNP_SNP_GA_6749317_Lg9_00280_MAF40_596961_exon1; Name=RosBREEDSNP_SNP_GA_6749317_Lg9_00280_MAF40_596961_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
GTGGAGTCCGAAAAAAGTGAACTGGGATTGGATAARGGTGCTAACAGTGC
AACTAAGGAAGCTGAGAATG

Alignments

Feature Name	Type	Location	Analysis
MDC016966.49	contig	MDC016966.49:15581..15581.	Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr09	chromosome	Chr09:7553674..7553674.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation