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GWAS0001242
GWAS Overview
Annotated Terms
Genome Location
Germplasm
Publications
GWAS Overview
GWAS Label
GWAS0001242 [
MapViewer
]
Published Symbol
procyanidin C1
Trait Name
unknown procyanidin oligomer 1 content
Trait Alias
N/A
GWAS Marker
RosBREEDSNP_SNP_CA_14512918_Lg2_00002_MAF20_577821_exon1
GWAS Study
Apple_phytochemicals_GWAS_Kumar_2022
Genome Assembly
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Statistical Mothod
MLM
Experimental Model
N/A
GWAS Panel
New_Zealand_apples_Hawke's_Bay_344
LOD
N/A
P Value
7.1E-8
R2
N/A
Unique key
3626-procyanidin C1 RosBREEDSNP_SNP_CA_14512918_Lg2_00002_MAF20_577821_exon1MLM
Comments
N/A
Annotated Terms
The following terms have been associated with this GWAS:
Vocabulary:
Rosaceae Trait Ontology
Term
Definition
MAIN:000201216
unknown procyanidin oligomer 1 content
Genome Location
Name
Type
Location
Analysis
MapViewer
MDC009817.314
contig
MDC009817.314:22552..22552
Malus x domestica Whole Genome v1.0 Assembly & Annotation
View
Chr02
chromosome
Chr02:12796369..12796369
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
View
Publications
Year
Publication
2022
Kumar S, Molloy C, Hunt M, Deng CH, Wiedow C, Andre C, Dare A, McGhie T. GWAS provides new insights into the genetic mechanisms of phytochemicals production and red skin colour in apple.. Horticulture research. 2022; 9:uhac218.
Germplasm
Stock Name
Type
New_Zealand_apples_Hawke's_Bay_344
panel