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Marker Overview
| Name | KASP_LG1_50.880 |
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| Genbank ID | N/A |
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| Type | KASP |
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| 5' Flanking Sequence | GGGCTCTAGAAGATCTCCAGAGGATTCATGCTGCTGAGGAGCTTGCTGCTGAAGAGGCAG
GTGG |
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| 3' Flanking Sequence | GTTGAAATGCATGTCCTTGAGGATGCAGGCCACTGGGTATGTTGGTTTTACTGTTTGAAG
T |
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| Species | Prunus avium |
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| Germplasm | Regina |
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| Primer 1 | KASP_LG1_50.880.Primer_AlleleX: GAAGGTGACCAAGTTCATGCTCATCCTCAAGGACATGCATTTCAACA |
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| Primer 2 | KASP_LG1_50.880.Primer_AlleleY: GAAGGTCGGAGTCAACGGATTCATCCTCAAGGACATGCATTTCAACT |
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| Primer 3 | KASP_LG1_50.880.Primer_Common: CTGCTGAGGAGCTTGCTGCTGAA |
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| Publication | [view all] |
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| Contact | Elisabeth Dirlewanger
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Alignments
The following features are aligned
| Feature Name | Type | Location | Analysis | Reference |
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| PAV01_REGINA | chromosome | PAV01_REGINA:50880246..50880246 . | Prunus avium Regina Genome v1.0 Assembly & Annotation | Branchereau C, Hardner C, Dirlewanger E, Wenden B, Le Dantec L, Alletru D, Parmentier J, Ivančič A, Giovannini D, Brandi F, Lopez-Ortega G, Garcia-Montiel F, Quilot-Turion B, Quero-García J. Genotype-by-environment and QTL-by-environment interactions in sweet cherry (Prunus avium L.) for flowering date.. Frontiers in plant science. 2023; 14:1142974. |
Publications
| Year | Publication |
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| 2023 | Branchereau C, Hardner C, Dirlewanger E, Wenden B, Le Dantec L, Alletru D, Parmentier J, Ivančič A, Giovannini D, Brandi F, Lopez-Ortega G, Garcia-Montiel F, Quilot-Turion B, Quero-García J. Genotype-by-environment and QTL-by-environment interactions in sweet cherry (Prunus avium L.) for flowering date.. Frontiers in plant science. 2023; 14:1142974. |
Germplasm
| Stock Name | Type |
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| Regina | accession |
Sequence
>KASP_LG1_50.880 ID=KASP_LG1_50.880; Name=KASP_LG1_50.880; organism=Prunus avium; type=genetic_marker; length=126bp
GGGCTCTAGAAGATCTCCAGAGGATTCATGCTGCTGAGGAGCTTGCTGCT
GAAGAGGCAGGTGGWGTTGAAATGCATGTCCTTGAGGATGCAGGCCACTG
GGTATGTTGGTTTTACTGTTTGAAGT
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