GWAS0001524 | GDR

Annotated Terms

Genome Location

GWAS Overview


GWAS Label	GWAS0001524 [ MapViewer ]
Published Symbol	Fruit weight
Trait Name	fruit fresh weight
Trait Alias	N/A
GWAS Marker	pav_Rgn_chr1_11561777
GWAS Study	Sweet_cherry_fruit_quality_GWAS_Regina_Donkpegan_2023
Genome Assembly	Prunus avium Regina Genome v1.0 Assembly & Annotation
Statistical Mothod	FarmCPU
Experimental Model	N/A
GWAS Panel	Sweet_cherry_fruit_quality_GWAS_Donkpegan_2023
LOD	N/A
P Value	4.11e−13
R2	5.1
Unique key	3695-Fruit weightpav_Rgn_chr1_11561777FarmCPU
Effect	-0.82
Allele	T/G
Comments	N/A

Annotated Terms

The following terms have been associated with this GWAS:

Vocabulary: **Rosaceae Trait Ontology**
Term	Definition
28:fruit fresh weight	fruit fresh weight

Genome Location


Name	Type	Location	Analysis	MapViewer
PAV01_REGINA	chromosome	PAV01_REGINA:11561777..11561777	Prunus avium Regina Genome v1.0 Assembly & Annotation	View

Publications


Year	Publication
2023	Donkpegan ASL, Bernard A, Barreneche T, Quero-García J, Bonnet H, Fouché M, Le Dantec L, Wenden B, Dirlewanger E. Genome-wide association mapping in a sweet cherry germplasm collection (Prunus avium L.) reveals candidate genes for fruit quality traits.. Horticulture research. 2023 Oct; 10(10), uhad191.

Germplasm


Stock Name	Type
Sweet_cherry_fruit_quality_GWAS_Donkpegan_2023	panel