GWAS0001948 | GDR

Annotated Terms

Genome Location

GWAS Overview


GWAS Label	GWAS0001948 [ MapViewer ]
Published Symbol	Flowering time
Trait Name	flower date 100%
Trait Alias	N/A
GWAS Marker	CPDCT044
GWAS Study	Peach_complex_traits_GWAS_Cao_2012
Genome Assembly	Prunus persica Whole Genome v1.0 Assembly & Annotation
Statistical Mothod	GLM
Experimental Model	N/A
GWAS Panel	Peach_complex_traits_GWAS_Cao_104
LOD	N/A
P Value	N/A
R2	17
Unique key	3741-Flowering timeCPDCT044GLM
Comments	N/A

Annotated Terms

The following terms have been associated with this GWAS:

Vocabulary: **Rosaceae Trait Ontology**
Term	Definition
28:full bloom date	flower date 100%

Genome Location


Name	Type	Location	Analysis	MapViewer
scaffold_2	supercontig	scaffold_2:9968143..9968584	Prunus persica Whole Genome v1.0 Assembly & Annotation	View
Pp02	chromosome	Pp02:16847924..16848272	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)	View
Pp02	chromosome	Pp02:652012..652453	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)	View
Pp01	chromosome	Pp01:27391264..27391701	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)	View

Publications


Year	Publication
2012	Cao K, Wang L, Zhu G, Fang W, Chen C, Luo J. Genetic diversity, linkage disequilibrium, and association mapping analyses of peach (Prunus persica) landraces in China. Tree genetics & genomes. 2012; 8(5):975-990.

Germplasm


Stock Name	Type
Peach_complex_traits_GWAS_Cao_104	panel