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Transcript Overview
| Name | DXR |
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| Unique Name | JX518616.1-DXR.m1 |
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| Type | mRNA |
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| Organism | Rosa rugosa () |
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| Source | genbank |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| JX518616.1-DXR.m1-cds1 | JX518616.1-DXR.m1-cds1 | Rosa rugosa | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| DXR | JX518616.1-DXR.p1 | Rosa rugosa | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| JX518616 |
region |
JX518616:1..1419+ |
NCBI Rosaceae gene and mRNA sequences |
Sequences
The
following sequences are available for this feature:
mRNA sequence >JX518616.1-DXR.m1 ID=JX518616.1-DXR.m1; Name=DXR; organism=Rosa rugosa; type=mRNA; length=1419bp
atggctctgaatctgttgtctccagctgaaattaaagcgatctctttctt
ggattccaccaagtccactcacttgccaaagcttccaggtgggtttgctt
tgaggaggagagattgcagaacggtgattggaagaagaattcagtgttca
gcacaagcaccaccacctccagcttggccgggaagtgcttttccggagcc
cggccggaggacttgggatggtccaaagcctatttctgttgttggatcta
ctggttccattggaacccagacattggacatagttgcagagaaccctgaa
aaattcagagttgtggccctagcagctggctcaaatgtcactcttcttgt
cgatcaggtgaagaggttcaaacccaaactagttgcagttagaaatgaat
cattacttaatgaacttaaagaggctctatctggtctagaagacaagcct
gagatcattcctggggagcaaggagtcattgaggttgctcggcacccaga
tgcagtcacagtagttacaggaatagtcggttgtgcaggactgaagccta
cagtggctgcaatagaagcagggaaagacatagctttagccaataaggag
actctgattgctggaggcccatttgttcttcctcttgcacacaagcataa
tgtgaaaattcttcctgctgattcagaacattctgcaatttttcagtgta
tccaaggcttgccagagggtgcacttcggcgtatcattttgacagcttct
ggtggggctttcagggattggcctgttgaaaaactcaaagaagttaaggt
tgctgatgctctgaaacatcctaactggagtatgggaaagaagataactg
ttgattcagctacgcttttcaataaggggctagaagtcattgaagcccat
tacttgtatggagctgagtatgatgatatcgagattgtgattcatccaca
atccatcatccattcgatgattgaaactcaggattcatctgttctagcac
agttggggtggcctgatatgcgcttgccaatcctctacaccatgtcatgg
ccagagagaatctattgctctgaagtaacctggccccggcttgatctttg
caagcttggttcactaacctttaaagctcctgacaacgtgaaatacccat
ccatggatcttgcctattctgctgggcgggccggtggcaccatgacagga
gttcttagtgcagcaaatgaaaaggccgtggagatgtttatcgatgaaaa
aattagttatctggatattttcaaggttgttgagctaacatgtgccaagc
acagggcagaactcgtgacctcaccttcccttgaggaaattgtacattat
gatttatgggctcgagattatgctgctaatctgcaaagctctacaagttc
aacccctgtatttgcatga back to topprotein sequence of DXR >JX518616.1-DXR.p1 ID=JX518616.1-DXR.p1; Name=DXR; organism=Rosa rugosa; type=polypeptide; length=472bp
MALNLLSPAEIKAISFLDSTKSTHLPKLPGGFALRRRDCRTVIGRRIQCS
AQAPPPPAWPGSAFPEPGRRTWDGPKPISVVGSTGSIGTQTLDIVAENPE
KFRVVALAAGSNVTLLVDQVKRFKPKLVAVRNESLLNELKEALSGLEDKP
EIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKE
TLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTAS
GGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAH
YLYGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSW
PERIYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSMDLAYSAGRAGGTMTG
VLSAANEKAVEMFIDEKISYLDIFKVVELTCAKHRAELVTSPSLEEIVHY
DLWARDYAANLQSSTSSTPVFA back to topmRNA from alignment at JX518616:1..1419+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >JX518616.1-DXR.m1 ID=JX518616.1-DXR.m1; Name=DXR; organism=Rosa rugosa; type=mRNA; length=1419bp; location=Sequence derived from: JX518616:1..1419+ (Rosa rugosa
atggctctgaatctgttgtctccagctgaaattaaagcgatctctttctt
ggattccaccaagtccactcacttgccaaagcttccaggtgggtttgctt
tgaggaggagagattgcagaacggtgattggaagaagaattcagtgttca
gcacaagcaccaccacctccagcttggccgggaagtgcttttccggagcc
cggccggaggacttgggatggtccaaagcctatttctgttgttggatcta
ctggttccattggaacccagacattggacatagttgcagagaaccctgaa
aaattcagagttgtggccctagcagctggctcaaatgtcactcttcttgt
cgatcaggtgaagaggttcaaacccaaactagttgcagttagaaatgaat
cattacttaatgaacttaaagaggctctatctggtctagaagacaagcct
gagatcattcctggggagcaaggagtcattgaggttgctcggcacccaga
tgcagtcacagtagttacaggaatagtcggttgtgcaggactgaagccta
cagtggctgcaatagaagcagggaaagacatagctttagccaataaggag
actctgattgctggaggcccatttgttcttcctcttgcacacaagcataa
tgtgaaaattcttcctgctgattcagaacattctgcaatttttcagtgta
tccaaggcttgccagagggtgcacttcggcgtatcattttgacagcttct
ggtggggctttcagggattggcctgttgaaaaactcaaagaagttaaggt
tgctgatgctctgaaacatcctaactggagtatgggaaagaagataactg
ttgattcagctacgcttttcaataaggggctagaagtcattgaagcccat
tacttgtatggagctgagtatgatgatatcgagattgtgattcatccaca
atccatcatccattcgatgattgaaactcaggattcatctgttctagcac
agttggggtggcctgatatgcgcttgccaatcctctacaccatgtcatgg
ccagagagaatctattgctctgaagtaacctggccccggcttgatctttg
caagcttggttcactaacctttaaagctcctgacaacgtgaaatacccat
ccatggatcttgcctattctgctgggcgggccggtggcaccatgacagga
gttcttagtgcagcaaatgaaaaggccgtggagatgtttatcgatgaaaa
aattagttatctggatattttcaaggttgttgagctaacatgtgccaagc
acagggcagaactcgtgacctcaccttcccttgaggaaattgtacattat
gatttatgggctcgagattatgctgctaatctgcaaagctctacaagttc
aacccctgtatttgcatga back to topCoding sequence (CDS) from alignment at JX518616:1..1419+ >JX518616.1-DXR.m1 ID=JX518616.1-DXR.m1; Name=DXR; organism=Rosa rugosa; type=CDS; length=1419bp; location=Sequence derived from: JX518616:1..1419+ (Rosa rugosa
atggctctgaatctgttgtctccagctgaaattaaagcgatctctttctt
ggattccaccaagtccactcacttgccaaagcttccaggtgggtttgctt
tgaggaggagagattgcagaacggtgattggaagaagaattcagtgttca
gcacaagcaccaccacctccagcttggccgggaagtgcttttccggagcc
cggccggaggacttgggatggtccaaagcctatttctgttgttggatcta
ctggttccattggaacccagacattggacatagttgcagagaaccctgaa
aaattcagagttgtggccctagcagctggctcaaatgtcactcttcttgt
cgatcaggtgaagaggttcaaacccaaactagttgcagttagaaatgaat
cattacttaatgaacttaaagaggctctatctggtctagaagacaagcct
gagatcattcctggggagcaaggagtcattgaggttgctcggcacccaga
tgcagtcacagtagttacaggaatagtcggttgtgcaggactgaagccta
cagtggctgcaatagaagcagggaaagacatagctttagccaataaggag
actctgattgctggaggcccatttgttcttcctcttgcacacaagcataa
tgtgaaaattcttcctgctgattcagaacattctgcaatttttcagtgta
tccaaggcttgccagagggtgcacttcggcgtatcattttgacagcttct
ggtggggctttcagggattggcctgttgaaaaactcaaagaagttaaggt
tgctgatgctctgaaacatcctaactggagtatgggaaagaagataactg
ttgattcagctacgcttttcaataaggggctagaagtcattgaagcccat
tacttgtatggagctgagtatgatgatatcgagattgtgattcatccaca
atccatcatccattcgatgattgaaactcaggattcatctgttctagcac
agttggggtggcctgatatgcgcttgccaatcctctacaccatgtcatgg
ccagagagaatctattgctctgaagtaacctggccccggcttgatctttg
caagcttggttcactaacctttaaagctcctgacaacgtgaaatacccat
ccatggatcttgcctattctgctgggcgggccggtggcaccatgacagga
gttcttagtgcagcaaatgaaaaggccgtggagatgtttatcgatgaaaa
aattagttatctggatattttcaaggttgttgagctaacatgtgccaagc
acagggcagaactcgtgacctcaccttcccttgaggaaattgtacattat
gatttatgggctcgagattatgctgctaatctgcaaagctctacaagttc
aacccctgtatttgcatga back to top
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