SNRK2.2, KJ563283.1-SNRK2.2.m1 (mRNA) Malus x domestica

Transcript Overview


Name	SNRK2.2
Unique Name	KJ563283.1-SNRK2.2.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	SnRK2.2
Genbank Note	MdSnRK2.2

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJ563283.1-SNRK2.2.m1-cds1	KJ563283.1-SNRK2.2.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
SNRK2.2	KJ563283.1-SNRK2.2.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	671722198
nuccore	KJ563283.1

Alignments

Feature Name	Type	Location	Analysis
KJ563283	region	KJ563283:1..1080+	NCBI Rosaceae gene and mRNA sequences
Chr15	chromosome	Chr15:24695695..24699965-	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr15	chromosome	chr15:22804734..22809166+	Malus x domestica Whole Genome v1.0 Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at KJ563283:1..1080+
coding sequence from alignment at KJ563283:1..1080+

mRNA sequence

>KJ563283.1-SNRK2.2.m1 ID=KJ563283.1-SNRK2.2.m1; Name=SNRK2.2; organism=Malus x domestica; type=mRNA; length=1080bp
atggatcggcaggcaatgacggttgggccggccatggatatgcctatcat
gcacgacagcgaccggtatgatttcgtccgagatatcgggtccggaaact
tcggggtcgccaggctgatgacggacaggcagaccagggagctcgtcgcc
gtcaagtacatcgagcgcggcaacaagattgatgaaaatgttcgaagaga
gataataaatcataggtctttgaggcacccgaacatcatcagattcaagg
aggtcattcttactcctacccatctggccattgtgatggaatatgcttct
ggaggagaaatgtttgagcgaatacacaatgcagggcggttcagtgagga
tgaggcccgcttcttttttcaacaacttatatctggagttagttattgcc
atgctatgcaagtatgtcaccgagatttgaagttggagaacactttattg
gatggcagtcaagctcctcgtttgaaaatttgtgattttgggtactcaaa
gtcttcagtgcttcattcacaaccaaaatctactgtgggaactcctgcat
acattgctccagaagtattattgaggcaagaatatgacggaaagattgca
gatgtatggtcatgtggggtaaccttatatgtgatgctggtgggagcata
tcctttcgaggatcctgatgaaccgaaagatttccggaggactatacaaa
ggatactcagcgtccagtattccattccagatactgttcaaatatctcat
gaatgtctagagctgatatcgagaatttttgtcccagatcctgctgcgag
aattagcattcctgagataaagaaccactcgtggttcttgaagaatctcc
ctgctgatttgatggacgagagcaaccagtttgaagagccagatcaacca
atgcaaagccttgacgcaatcatgcatataattgaggaggctactatacc
agcagcgggaacccttggtctgggctcgtacatgatggacaaccttgaca
tggacgatgatatggatgacttagactcagagtctgaacttgatgttgat
agcagcggggaaatagtctacgcaatttaa

protein sequence of SNRK2.2

>KJ563283.1-SNRK2.2.p1 ID=KJ563283.1-SNRK2.2.p1; Name=SNRK2.2; organism=Malus x domestica; type=polypeptide; length=359bp
MDRQAMTVGPAMDMPIMHDSDRYDFVRDIGSGNFGVARLMTDRQTRELVA
VKYIERGNKIDENVRREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYAS
GGEMFERIHNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL
DGSQAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIA
DVWSCGVTLYVMLVGAYPFEDPDEPKDFRRTIQRILSVQYSIPDTVQISH
ECLELISRIFVPDPAARISIPEIKNHSWFLKNLPADLMDESNQFEEPDQP
MQSLDAIMHIIEEATIPAAGTLGLGSYMMDNLDMDDDMDDLDSESELDVD
SSGEIVYAI

mRNA from alignment at KJ563283:1..1080+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJ563283.1-SNRK2.2.m1 ID=KJ563283.1-SNRK2.2.m1; Name=SNRK2.2; organism=Malus x domestica; type=mRNA; length=1080bp; location=Sequence derived from: KJ563283:1..1080+ (Malus x domestica
atggatcggcaggcaatgacggttgggccggccatggatatgcctatcat
gcacgacagcgaccggtatgatttcgtccgagatatcgggtccggaaact
tcggggtcgccaggctgatgacggacaggcagaccagggagctcgtcgcc
gtcaagtacatcgagcgcggcaacaagattgatgaaaatgttcgaagaga
gataataaatcataggtctttgaggcacccgaacatcatcagattcaagg
aggtcattcttactcctacccatctggccattgtgatggaatatgcttct
ggaggagaaatgtttgagcgaatacacaatgcagggcggttcagtgagga
tgaggcccgcttcttttttcaacaacttatatctggagttagttattgcc
atgctatgcaagtatgtcaccgagatttgaagttggagaacactttattg
gatggcagtcaagctcctcgtttgaaaatttgtgattttgggtactcaaa
gtcttcagtgcttcattcacaaccaaaatctactgtgggaactcctgcat
acattgctccagaagtattattgaggcaagaatatgacggaaagattgca
gatgtatggtcatgtggggtaaccttatatgtgatgctggtgggagcata
tcctttcgaggatcctgatgaaccgaaagatttccggaggactatacaaa
ggatactcagcgtccagtattccattccagatactgttcaaatatctcat
gaatgtctagagctgatatcgagaatttttgtcccagatcctgctgcgag
aattagcattcctgagataaagaaccactcgtggttcttgaagaatctcc
ctgctgatttgatggacgagagcaaccagtttgaagagccagatcaacca
atgcaaagccttgacgcaatcatgcatataattgaggaggctactatacc
agcagcgggaacccttggtctgggctcgtacatgatggacaaccttgaca
tggacgatgatatggatgacttagactcagagtctgaacttgatgttgat
agcagcggggaaatagtctacgcaatttaa

Coding sequence (CDS) from alignment at KJ563283:1..1080+

>KJ563283.1-SNRK2.2.m1 ID=KJ563283.1-SNRK2.2.m1; Name=SNRK2.2; organism=Malus x domestica; type=CDS; length=1080bp; location=Sequence derived from: KJ563283:1..1080+ (Malus x domestica
atggatcggcaggcaatgacggttgggccggccatggatatgcctatcat
gcacgacagcgaccggtatgatttcgtccgagatatcgggtccggaaact
tcggggtcgccaggctgatgacggacaggcagaccagggagctcgtcgcc
gtcaagtacatcgagcgcggcaacaagattgatgaaaatgttcgaagaga
gataataaatcataggtctttgaggcacccgaacatcatcagattcaagg
aggtcattcttactcctacccatctggccattgtgatggaatatgcttct
ggaggagaaatgtttgagcgaatacacaatgcagggcggttcagtgagga
tgaggcccgcttcttttttcaacaacttatatctggagttagttattgcc
atgctatgcaagtatgtcaccgagatttgaagttggagaacactttattg
gatggcagtcaagctcctcgtttgaaaatttgtgattttgggtactcaaa
gtcttcagtgcttcattcacaaccaaaatctactgtgggaactcctgcat
acattgctccagaagtattattgaggcaagaatatgacggaaagattgca
gatgtatggtcatgtggggtaaccttatatgtgatgctggtgggagcata
tcctttcgaggatcctgatgaaccgaaagatttccggaggactatacaaa
ggatactcagcgtccagtattccattccagatactgttcaaatatctcat
gaatgtctagagctgatatcgagaatttttgtcccagatcctgctgcgag
aattagcattcctgagataaagaaccactcgtggttcttgaagaatctcc
ctgctgatttgatggacgagagcaaccagtttgaagagccagatcaacca
atgcaaagccttgacgcaatcatgcatataattgaggaggctactatacc
agcagcgggaacccttggtctgggctcgtacatgatggacaaccttgaca
tggacgatgatatggatgacttagactcagagtctgaacttgatgttgat
agcagcggggaaatagtctacgcaatttaa