SNRK2.4, KJ748365.1-SNRK2.4.m1 (mRNA) Fragaria x ananassa

Transcript Overview


Name	SNRK2.4
Unique Name	KJ748365.1-SNRK2.4.m1
Type	mRNA
Organism	Fragaria x ananassa (Strawberry)
Source	genbank
Product	sucrose nonfermenting 1-related protein kinase 2.4
Genbank Note	member of SNF1-related protein kinases (SnRK2)

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJ748365.1-SNRK2.4.m1-cds1	KJ748365.1-SNRK2.4.m1-cds1	Fragaria x ananassa	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
SNRK2.4	KJ748365.1-SNRK2.4.p1	Fragaria x ananassa	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	668349474
nuccore	KJ748365.1

Alignments

Feature Name	Type	Location	Analysis
KJ748365	region	KJ748365:1..1014+	NCBI Rosaceae gene and mRNA sequences
LG5	chromosome	LG5:12537368..12540312+	Fragaria vesca Whole Genome v1.0 (build 8) Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at KJ748365:1..1014+
coding sequence from alignment at KJ748365:1..1014+

mRNA sequence

>KJ748365.1-SNRK2.4.m1 ID=KJ748365.1-SNRK2.4.m1; Name=SNRK2.4; organism=Fragaria x ananassa; type=mRNA; length=1014bp
atggaggagaggtatgagccaatgaaggatcttgggtctggcaactttgg
agtggcgaggctggtcagggataagaagaccagggagcttgtggctgtga
agtacatagagagaggcaagaagattgatgagaatgttcagagggaaatt
attaatcacagatccttgaggcatcctaatattgtcaggttcaaagaggt
cctgttgactccaagtcatctagctattgtcatggaatatgcagctggtg
gtgaactctttgagaggatatgtagtgctggtagatttagtgaagatgag
gcaagatttttcttccagcagctgatatctggagtcagctactgtcattc
catggaaatctgtcacagggatctgaagctggaaaacacactcttggatg
gaagtgcgacaccacgtctgaaaatttgtgactttggatactccaagtct
gctattttgcattcgcaaccaaaatcaactgttggaacacctgcttacat
tgctccggaggttctgtcacggaaggaatatgatggaaagattgcagatg
tttggtcctgtggtgtgacactatatgtcatgttggtaggagcatatcct
tttgaggatcccgaagaccctcgaaattttcgtaagaccattgagagaat
tatgagtgtccagtacaccatacccgattatgttcgtatttcagcagact
gcaagcacctactgtctcgtatttttgttgccaacccatctaagaggctc
agtcttcctgagataaaacagcacccttggtttctgaaaaatttggcaaa
agagctaattgaggttgagaaaaaaagctttgcggaagtggaacgtgaca
acccgacacagaacattgaagaaataaataagatcatacaagatgcaagg
acaccaggggaaggttccaaaggagttggccaagctgttgcaggagcagg
accatccgactctgatgatgtagatttggactcagaagttgatcttagtg
gtgactttgcttga

protein sequence of SNRK2.4

>KJ748365.1-SNRK2.4.p1 ID=KJ748365.1-SNRK2.4.p1; Name=SNRK2.4; organism=Fragaria x ananassa; type=polypeptide; length=337bp
MEERYEPMKDLGSGNFGVARLVRDKKTRELVAVKYIERGKKIDENVQREI
INHRSLRHPNIVRFKEVLLTPSHLAIVMEYAAGGELFERICSAGRFSEDE
ARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSATPRLKICDFGYSKS
AILHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYP
FEDPEDPRNFRKTIERIMSVQYTIPDYVRISADCKHLLSRIFVANPSKRL
SLPEIKQHPWFLKNLAKELIEVEKKSFAEVERDNPTQNIEEINKIIQDAR
TPGEGSKGVGQAVAGAGPSDSDDVDLDSEVDLSGDFA

mRNA from alignment at KJ748365:1..1014+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJ748365.1-SNRK2.4.m1 ID=KJ748365.1-SNRK2.4.m1; Name=SNRK2.4; organism=Fragaria x ananassa; type=mRNA; length=1014bp; location=Sequence derived from: KJ748365:1..1014+ (Fragaria x ananassa
atggaggagaggtatgagccaatgaaggatcttgggtctggcaactttgg
agtggcgaggctggtcagggataagaagaccagggagcttgtggctgtga
agtacatagagagaggcaagaagattgatgagaatgttcagagggaaatt
attaatcacagatccttgaggcatcctaatattgtcaggttcaaagaggt
cctgttgactccaagtcatctagctattgtcatggaatatgcagctggtg
gtgaactctttgagaggatatgtagtgctggtagatttagtgaagatgag
gcaagatttttcttccagcagctgatatctggagtcagctactgtcattc
catggaaatctgtcacagggatctgaagctggaaaacacactcttggatg
gaagtgcgacaccacgtctgaaaatttgtgactttggatactccaagtct
gctattttgcattcgcaaccaaaatcaactgttggaacacctgcttacat
tgctccggaggttctgtcacggaaggaatatgatggaaagattgcagatg
tttggtcctgtggtgtgacactatatgtcatgttggtaggagcatatcct
tttgaggatcccgaagaccctcgaaattttcgtaagaccattgagagaat
tatgagtgtccagtacaccatacccgattatgttcgtatttcagcagact
gcaagcacctactgtctcgtatttttgttgccaacccatctaagaggctc
agtcttcctgagataaaacagcacccttggtttctgaaaaatttggcaaa
agagctaattgaggttgagaaaaaaagctttgcggaagtggaacgtgaca
acccgacacagaacattgaagaaataaataagatcatacaagatgcaagg
acaccaggggaaggttccaaaggagttggccaagctgttgcaggagcagg
accatccgactctgatgatgtagatttggactcagaagttgatcttagtg
gtgactttgcttga

Coding sequence (CDS) from alignment at KJ748365:1..1014+

>KJ748365.1-SNRK2.4.m1 ID=KJ748365.1-SNRK2.4.m1; Name=SNRK2.4; organism=Fragaria x ananassa; type=CDS; length=1014bp; location=Sequence derived from: KJ748365:1..1014+ (Fragaria x ananassa
atggaggagaggtatgagccaatgaaggatcttgggtctggcaactttgg
agtggcgaggctggtcagggataagaagaccagggagcttgtggctgtga
agtacatagagagaggcaagaagattgatgagaatgttcagagggaaatt
attaatcacagatccttgaggcatcctaatattgtcaggttcaaagaggt
cctgttgactccaagtcatctagctattgtcatggaatatgcagctggtg
gtgaactctttgagaggatatgtagtgctggtagatttagtgaagatgag
gcaagatttttcttccagcagctgatatctggagtcagctactgtcattc
catggaaatctgtcacagggatctgaagctggaaaacacactcttggatg
gaagtgcgacaccacgtctgaaaatttgtgactttggatactccaagtct
gctattttgcattcgcaaccaaaatcaactgttggaacacctgcttacat
tgctccggaggttctgtcacggaaggaatatgatggaaagattgcagatg
tttggtcctgtggtgtgacactatatgtcatgttggtaggagcatatcct
tttgaggatcccgaagaccctcgaaattttcgtaagaccattgagagaat
tatgagtgtccagtacaccatacccgattatgttcgtatttcagcagact
gcaagcacctactgtctcgtatttttgttgccaacccatctaagaggctc
agtcttcctgagataaaacagcacccttggtttctgaaaaatttggcaaa
agagctaattgaggttgagaaaaaaagctttgcggaagtggaacgtgaca
acccgacacagaacattgaagaaataaataagatcatacaagatgcaagg
acaccaggggaaggttccaaaggagttggccaagctgttgcaggagcagg
accatccgactctgatgatgtagatttggactcagaagttgatcttagtg
gtgactttgcttga