F3H, HM854008.1-F3H.m1 (mRNA) Fragaria x ananassa

Transcript Overview


Name	F3H
Unique Name	HM854008.1-F3H.m1
Type	mRNA
Organism	Fragaria x ananassa (Strawberry)
Source	genbank
Product	flavonoid 3'-hydroxylase

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
HM854008.1-F3H.m1-cds1	HM854008.1-F3H.m1-cds1	Fragaria x ananassa	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
F3H	HM854008.1-F3H.p1	Fragaria x ananassa	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	332348707
nuccore	HM854008.1

Alignments

Feature Name	Type	Location	Analysis
HM854008	region	HM854008:1..1533+	NCBI Rosaceae gene and mRNA sequences
LG5	chromosome	LG5:7611689..7614822+	Fragaria vesca Whole Genome v1.0 (build 8) Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HM854008:1..1533+
coding sequence from alignment at HM854008:1..1533+

mRNA sequence

>HM854008.1-F3H.m1 ID=HM854008.1-F3H.m1; Name=F3H; organism=Fragaria x ananassa; type=mRNA; length=1533bp
atgtttctcatagcagcgatcacccttctcgtcgccgtggttctattccg
gcttcttttctccggcaaatcccaacgtcgctcgcttcctctccctcctg
gccccaaaccatggcctgtcgtcgggaacttgcctcacttgggccctttt
ccgcaccactctctggcggagttggcgcagaaacacgggcccctcatgca
cctccgcctcggttatgttgacgtagtggtggcggcatcagcatccgtag
cgtctcagttcttgaagactcacgacgctaacttctccagccggccaccc
aactccggcgccaagtacatggcctacaactaccaggacctcgtgttcag
gccctacagtccacggtggcgccagttccggaagatcagctccgtccatc
ttttctccggcaaggccttggatgaccttaaacacgtccggcaggaggag
gtagctgtgctagcgcatgccttagcaaatgcagggtcaaaggtagtgaa
cctggcgcaactactcaacttgtgcacggtcaacgccctagggcgagtga
tggtagggcggagggttttcggcgacggcagcggcagcgacgatccgaag
gcggacgagttcaagtcaatggtggtggagatgatggtgttggcaggagt
gcccaacataggtgacttcattccctgccttgagtggcttgacttgcaag
gtgtggcgtccaagatgaagaagctccacaagagattcgacgacttcttg
atggccattgtcgaggatcacaagaagagcaccagcacggcggcgcacgt
cgacatgttgaccactctgctctccctccaggaagacgccgacggcgaag
gtgccaagctcaccgacaccgagatcaaggctttgcttttgaacatgttc
acagctggcactgatacgtcatcgagcacggtagaatgggcattggccga
acttattaagcaccctcatatgttagcgcgactccgaaaagagttggatg
atgttgttggacatgaccgactcgtgacagaaccggacctacccaagctc
acctacctccaggccgttatcaaggagacgttccggcttcacccgtccac
tcctctctcattgcctcgtatggcggccgagagttgtgaaatcaacgggt
accacatcccgaagggttccacattgttagtcaatgtatgggccatatcg
cgtgacccggctgaatgggccgaaccgttggagtttaggcctgaaaggtt
cttaccgggcggcgaaaagcctaatgttgatattagaggaaatgattttg
aagtcataccctttggtgctgggagaagaatatgtgctgggatgagcttg
ggcctccgtatggttagtttgatgactgcaacattggtccatgcgtttga
ttggaccttggctgatgggacacctgagaagttaaacatggatgaagcat
ttgggctcactctacaacgagctgcaccgttaatgatgcacccgcgcacc
cggctagccccacatgcttataaaacttcatca

protein sequence of F3H

>HM854008.1-F3H.p1 ID=HM854008.1-F3H.p1; Name=F3H; organism=Fragaria x ananassa; type=polypeptide; length=511bp
MFLIAAITLLVAVVLFRLLFSGKSQRRSLPLPPGPKPWPVVGNLPHLGPF
PHHSLAELAQKHGPLMHLRLGYVDVVVAASASVASQFLKTHDANFSSRPP
NSGAKYMAYNYQDLVFRPYSPRWRQFRKISSVHLFSGKALDDLKHVRQEE
VAVLAHALANAGSKVVNLAQLLNLCTVNALGRVMVGRRVFGDGSGSDDPK
ADEFKSMVVEMMVLAGVPNIGDFIPCLEWLDLQGVASKMKKLHKRFDDFL
MAIVEDHKKSTSTAAHVDMLTTLLSLQEDADGEGAKLTDTEIKALLLNMF
TAGTDTSSSTVEWALAELIKHPHMLARLRKELDDVVGHDRLVTEPDLPKL
TYLQAVIKETFRLHPSTPLSLPRMAAESCEINGYHIPKGSTLLVNVWAIS
RDPAEWAEPLEFRPERFLPGGEKPNVDIRGNDFEVIPFGAGRRICAGMSL
GLRMVSLMTATLVHAFDWTLADGTPEKLNMDEAFGLTLQRAAPLMMHPRT
RLAPHAYKTSS

mRNA from alignment at HM854008:1..1533+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>HM854008.1-F3H.m1 ID=HM854008.1-F3H.m1; Name=F3H; organism=Fragaria x ananassa; type=mRNA; length=1533bp; location=Sequence derived from: HM854008:1..1533+ (Fragaria x ananassa
atgtttctcatagcagcgatcacccttctcgtcgccgtggttctattccg
gcttcttttctccggcaaatcccaacgtcgctcgcttcctctccctcctg
gccccaaaccatggcctgtcgtcgggaacttgcctcacttgggccctttt
ccgcaccactctctggcggagttggcgcagaaacacgggcccctcatgca
cctccgcctcggttatgttgacgtagtggtggcggcatcagcatccgtag
cgtctcagttcttgaagactcacgacgctaacttctccagccggccaccc
aactccggcgccaagtacatggcctacaactaccaggacctcgtgttcag
gccctacagtccacggtggcgccagttccggaagatcagctccgtccatc
ttttctccggcaaggccttggatgaccttaaacacgtccggcaggaggag
gtagctgtgctagcgcatgccttagcaaatgcagggtcaaaggtagtgaa
cctggcgcaactactcaacttgtgcacggtcaacgccctagggcgagtga
tggtagggcggagggttttcggcgacggcagcggcagcgacgatccgaag
gcggacgagttcaagtcaatggtggtggagatgatggtgttggcaggagt
gcccaacataggtgacttcattccctgccttgagtggcttgacttgcaag
gtgtggcgtccaagatgaagaagctccacaagagattcgacgacttcttg
atggccattgtcgaggatcacaagaagagcaccagcacggcggcgcacgt
cgacatgttgaccactctgctctccctccaggaagacgccgacggcgaag
gtgccaagctcaccgacaccgagatcaaggctttgcttttgaacatgttc
acagctggcactgatacgtcatcgagcacggtagaatgggcattggccga
acttattaagcaccctcatatgttagcgcgactccgaaaagagttggatg
atgttgttggacatgaccgactcgtgacagaaccggacctacccaagctc
acctacctccaggccgttatcaaggagacgttccggcttcacccgtccac
tcctctctcattgcctcgtatggcggccgagagttgtgaaatcaacgggt
accacatcccgaagggttccacattgttagtcaatgtatgggccatatcg
cgtgacccggctgaatgggccgaaccgttggagtttaggcctgaaaggtt
cttaccgggcggcgaaaagcctaatgttgatattagaggaaatgattttg
aagtcataccctttggtgctgggagaagaatatgtgctgggatgagcttg
ggcctccgtatggttagtttgatgactgcaacattggtccatgcgtttga
ttggaccttggctgatgggacacctgagaagttaaacatggatgaagcat
ttgggctcactctacaacgagctgcaccgttaatgatgcacccgcgcacc
cggctagccccacatgcttataaaacttcatca

Coding sequence (CDS) from alignment at HM854008:1..1533+

>HM854008.1-F3H.m1 ID=HM854008.1-F3H.m1; Name=F3H; organism=Fragaria x ananassa; type=CDS; length=1533bp; location=Sequence derived from: HM854008:1..1533+ (Fragaria x ananassa
atgtttctcatagcagcgatcacccttctcgtcgccgtggttctattccg
gcttcttttctccggcaaatcccaacgtcgctcgcttcctctccctcctg
gccccaaaccatggcctgtcgtcgggaacttgcctcacttgggccctttt
ccgcaccactctctggcggagttggcgcagaaacacgggcccctcatgca
cctccgcctcggttatgttgacgtagtggtggcggcatcagcatccgtag
cgtctcagttcttgaagactcacgacgctaacttctccagccggccaccc
aactccggcgccaagtacatggcctacaactaccaggacctcgtgttcag
gccctacagtccacggtggcgccagttccggaagatcagctccgtccatc
ttttctccggcaaggccttggatgaccttaaacacgtccggcaggaggag
gtagctgtgctagcgcatgccttagcaaatgcagggtcaaaggtagtgaa
cctggcgcaactactcaacttgtgcacggtcaacgccctagggcgagtga
tggtagggcggagggttttcggcgacggcagcggcagcgacgatccgaag
gcggacgagttcaagtcaatggtggtggagatgatggtgttggcaggagt
gcccaacataggtgacttcattccctgccttgagtggcttgacttgcaag
gtgtggcgtccaagatgaagaagctccacaagagattcgacgacttcttg
atggccattgtcgaggatcacaagaagagcaccagcacggcggcgcacgt
cgacatgttgaccactctgctctccctccaggaagacgccgacggcgaag
gtgccaagctcaccgacaccgagatcaaggctttgcttttgaacatgttc
acagctggcactgatacgtcatcgagcacggtagaatgggcattggccga
acttattaagcaccctcatatgttagcgcgactccgaaaagagttggatg
atgttgttggacatgaccgactcgtgacagaaccggacctacccaagctc
acctacctccaggccgttatcaaggagacgttccggcttcacccgtccac
tcctctctcattgcctcgtatggcggccgagagttgtgaaatcaacgggt
accacatcccgaagggttccacattgttagtcaatgtatgggccatatcg
cgtgacccggctgaatgggccgaaccgttggagtttaggcctgaaaggtt
cttaccgggcggcgaaaagcctaatgttgatattagaggaaatgattttg
aagtcataccctttggtgctgggagaagaatatgtgctgggatgagcttg
ggcctccgtatggttagtttgatgactgcaacattggtccatgcgtttga
ttggaccttggctgatgggacacctgagaagttaaacatggatgaagcat
ttgggctcactctacaacgagctgcaccgttaatgatgcacccgcgcacc
cggctagccccacatgcttataaaacttcatca