|
|
Transcript Overview
| Name | BBM1 |
|---|
| Unique Name | KC429673.1-BBM1.m1 |
|---|
| Type | mRNA |
|---|
| Organism | Rosa canina () |
|---|
| Source | genbank |
|---|
| Product | BBM1 |
|---|
| Genbank Note | transcription factor of AP2 family; RcBBM1 |
|---|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KC429673.1-BBM1.m1-cds1 | KC429673.1-BBM1.m1-cds1 | Rosa canina | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BBM1 | KC429673.1-BBM1.p1 | Rosa canina | polypeptide |
Cross References
External references for this mRNA
Sequences
The
following sequences are available for this feature:
mRNA sequence >KC429673.1-BBM1.m1 ID=KC429673.1-BBM1.m1; Name=BBM1; organism=Rosa canina; type=mRNA; length=2499bp
atgaacatgaactggttgggtttctctctttcccctcaagaagatgatca
tgctccaatatcacaccagctggctgaccaagagaccttagcctctcgcc
ttggctttaactccaatgaaatccaaggtgccggtggtggcactgatgtc
tccggtggcggaagcagtgagtgctttgatgttactaattctgactccac
tgcttctgtcaatcaccacctcactccatctatttttggcatacatgaag
ctgcagctttcaacaggaacaatgatcatatccattcccaagattggaat
atgaagggtgctggtatgaactcatcagatagcaataactacaaaaggac
ctcatcttcagacctgtcgactatgctaatgggaagcaataccagtacta
ctagtacttcatacagcattatcagccagcaggcgaaccttgaaaaccat
catcaacaactaccaaagcttgaaaacttccttggccggcattcttttgc
ggatcatgacagcagcagtgctggccatgattacatgtttgatatgaata
atggacccggtccagttagcagtaatgttatgaatactaaaactaatagt
aacaatattgggttgtccatgatcaagacgtggctgagaaatcaaccttc
tcagccgcgcgataaccaccatcagctggagcaggagagcaagaatagta
aggagagcagaaatcaaccacagagtagtctatcgctctcaatgggtact
ggatcgcttcaaacagttactactgcaactgcaggtggtgctgctactgg
agaaactactagttcatcagataaaaatactaaacagtcaccagtggtga
cagccacaacaacaacggggactgatgcccaaactcagagtactggtggt
gctattgaggccgtgcccagaaaggccattgatacatttggccaaaggac
atctatataccgtggtgtaaccaggcacagatggacaggtagatatgaag
cccatctatgggataatagttgccgaagagaaggacaaactcgcaaggga
aggcaagtttatttgggtggttatgacaaagaagacaaagcggctagagc
ttatgacttagcagcattgaaatattggggcaccacaaccactaccaact
tcccgatcagtagctatgagaaagagattgatgaaatgaagcccatgaca
agacaggagtatgttgcatctttgaggagaaagagtagcggattttctcg
gggtgcatccatttatcgtggggtgacaaggcaccaccagcatgggagat
ggcaagcaaggattgggagagtcgcagggaacaaagatttgtacctcgga
actttcagcacccaagaggaagcagccgaggcatatgacattgctgccat
aaagttccgaggacttaatgcagtaaccaactttgacatgagcagatatg
atgtcaagtccattctggagagcagcgcattgcccatcactactggtgcc
actgcaaagcgattgaaagacgttcagcagcagcagccgcctcctcctgc
agatcatcatcatcagatcatgttgtcgtctgtgctggatcatcacggac
aggttatcagatcctcatcatcaacagaacatgacatcatgagcaatgtg
tactcagcatatggatcttatggagcccagcaggggtgcagttggccaac
tcttgcattcaaccaagcccaagctcaagcagctgctgctcctcatcaag
cgccttttgccgctggcatcaatggcatgcagttgcactactcgccgtat
ggatatggatatggtaatgcacatgcacagagggtttggtgcaagcaaga
gcaagatactaattcaaatcaggaaaggagctttcatcatcaggatgatg
atcatcttcgtcaacaactccagttgggaggtacccacaatttctttcat
gaccatgatcagcagcagcagcagcagcagcagcagactagtggccttat
gggactaatggattcttcagcagcatctatggaacacagctcaggttcaa
attctgtcatatatagtggtggagatcaccatggtaataataatgggtat
ggaagcagtactacagggactggtggtggctatataatgcccatggttat
gagtacagttgtagccaatgatgaccaaaatcaagctgatggaaataata
acaatatcaatggttttggagatggtgatgatcaggaggccaatattaag
gcgcagcagcttggttatgatcatcatcctcaaaatatgtttcttggttc
aagtagtactatagatcccgcttatcagcatcacgcaagcaacaggaact
tgtattatcatcttccagtacaggatgatcagcatgaatcgtcgtcagtg
gcagttgctactagtagtactacatgtaacatgaattgggtaccaacagc
tgttccaactcttgctcatcctacttttacagtctggaacgacacatag back to topprotein sequence of BBM1 >KC429673.1-BBM1.p1 ID=KC429673.1-BBM1.p1; Name=BBM1; organism=Rosa canina; type=polypeptide; length=832bp
MNMNWLGFSLSPQEDDHAPISHQLADQETLASRLGFNSNEIQGAGGGTDV
SGGGSSECFDVTNSDSTASVNHHLTPSIFGIHEAAAFNRNNDHIHSQDWN
MKGAGMNSSDSNNYKRTSSSDLSTMLMGSNTSTTSTSYSIISQQANLENH
HQQLPKLENFLGRHSFADHDSSSAGHDYMFDMNNGPGPVSSNVMNTKTNS
NNIGLSMIKTWLRNQPSQPRDNHHQLEQESKNSKESRNQPQSSLSLSMGT
GSLQTVTTATAGGAATGETTSSSDKNTKQSPVVTATTTTGTDAQTQSTGG
AIEAVPRKAIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKG
RQVYLGGYDKEDKAARAYDLAALKYWGTTTTTNFPISSYEKEIDEMKPMT
RQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLG
TFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESSALPITTGA
TAKRLKDVQQQQPPPPADHHHQIMLSSVLDHHGQVIRSSSSTEHDIMSNV
YSAYGSYGAQQGCSWPTLAFNQAQAQAAAAPHQAPFAAGINGMQLHYSPY
GYGYGNAHAQRVWCKQEQDTNSNQERSFHHQDDDHLRQQLQLGGTHNFFH
DHDQQQQQQQQQTSGLMGLMDSSAASMEHSSGSNSVIYSGGDHHGNNNGY
GSSTTGTGGGYIMPMVMSTVVANDDQNQADGNNNNINGFGDGDDQEANIK
AQQLGYDHHPQNMFLGSSSTIDPAYQHHASNRNLYYHLPVQDDQHESSSV
AVATSSTTCNMNWVPTAVPTLAHPTFTVWNDT back to topmRNA from alignment at KC429673:295..2793+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >KC429673.1-BBM1.m1 ID=KC429673.1-BBM1.m1; Name=BBM1; organism=Rosa canina; type=mRNA; length=2499bp; location=Sequence derived from: KC429673:295..2793+ (Rosa canina
atgaacatgaactggttgggtttctctctttcccctcaagaagatgatca
tgctccaatatcacaccagctggctgaccaagagaccttagcctctcgcc
ttggctttaactccaatgaaatccaaggtgccggtggtggcactgatgtc
tccggtggcggaagcagtgagtgctttgatgttactaattctgactccac
tgcttctgtcaatcaccacctcactccatctatttttggcatacatgaag
ctgcagctttcaacaggaacaatgatcatatccattcccaagattggaat
atgaagggtgctggtatgaactcatcagatagcaataactacaaaaggac
ctcatcttcagacctgtcgactatgctaatgggaagcaataccagtacta
ctagtacttcatacagcattatcagccagcaggcgaaccttgaaaaccat
catcaacaactaccaaagcttgaaaacttccttggccggcattcttttgc
ggatcatgacagcagcagtgctggccatgattacatgtttgatatgaata
atggacccggtccagttagcagtaatgttatgaatactaaaactaatagt
aacaatattgggttgtccatgatcaagacgtggctgagaaatcaaccttc
tcagccgcgcgataaccaccatcagctggagcaggagagcaagaatagta
aggagagcagaaatcaaccacagagtagtctatcgctctcaatgggtact
ggatcgcttcaaacagttactactgcaactgcaggtggtgctgctactgg
agaaactactagttcatcagataaaaatactaaacagtcaccagtggtga
cagccacaacaacaacggggactgatgcccaaactcagagtactggtggt
gctattgaggccgtgcccagaaaggccattgatacatttggccaaaggac
atctatataccgtggtgtaaccaggcacagatggacaggtagatatgaag
cccatctatgggataatagttgccgaagagaaggacaaactcgcaaggga
aggcaagtttatttgggtggttatgacaaagaagacaaagcggctagagc
ttatgacttagcagcattgaaatattggggcaccacaaccactaccaact
tcccgatcagtagctatgagaaagagattgatgaaatgaagcccatgaca
agacaggagtatgttgcatctttgaggagaaagagtagcggattttctcg
gggtgcatccatttatcgtggggtgacaaggcaccaccagcatgggagat
ggcaagcaaggattgggagagtcgcagggaacaaagatttgtacctcgga
actttcagcacccaagaggaagcagccgaggcatatgacattgctgccat
aaagttccgaggacttaatgcagtaaccaactttgacatgagcagatatg
atgtcaagtccattctggagagcagcgcattgcccatcactactggtgcc
actgcaaagcgattgaaagacgttcagcagcagcagccgcctcctcctgc
agatcatcatcatcagatcatgttgtcgtctgtgctggatcatcacggac
aggttatcagatcctcatcatcaacagaacatgacatcatgagcaatgtg
tactcagcatatggatcttatggagcccagcaggggtgcagttggccaac
tcttgcattcaaccaagcccaagctcaagcagctgctgctcctcatcaag
cgccttttgccgctggcatcaatggcatgcagttgcactactcgccgtat
ggatatggatatggtaatgcacatgcacagagggtttggtgcaagcaaga
gcaagatactaattcaaatcaggaaaggagctttcatcatcaggatgatg
atcatcttcgtcaacaactccagttgggaggtacccacaatttctttcat
gaccatgatcagcagcagcagcagcagcagcagcagactagtggccttat
gggactaatggattcttcagcagcatctatggaacacagctcaggttcaa
attctgtcatatatagtggtggagatcaccatggtaataataatgggtat
ggaagcagtactacagggactggtggtggctatataatgcccatggttat
gagtacagttgtagccaatgatgaccaaaatcaagctgatggaaataata
acaatatcaatggttttggagatggtgatgatcaggaggccaatattaag
gcgcagcagcttggttatgatcatcatcctcaaaatatgtttcttggttc
aagtagtactatagatcccgcttatcagcatcacgcaagcaacaggaact
tgtattatcatcttccagtacaggatgatcagcatgaatcgtcgtcagtg
gcagttgctactagtagtactacatgtaacatgaattgggtaccaacagc
tgttccaactcttgctcatcctacttttacagtctggaacgacacatag back to topCoding sequence (CDS) from alignment at KC429673:295..2793+ >KC429673.1-BBM1.m1 ID=KC429673.1-BBM1.m1; Name=BBM1; organism=Rosa canina; type=CDS; length=2499bp; location=Sequence derived from: KC429673:295..2793+ (Rosa canina
atgaacatgaactggttgggtttctctctttcccctcaagaagatgatca
tgctccaatatcacaccagctggctgaccaagagaccttagcctctcgcc
ttggctttaactccaatgaaatccaaggtgccggtggtggcactgatgtc
tccggtggcggaagcagtgagtgctttgatgttactaattctgactccac
tgcttctgtcaatcaccacctcactccatctatttttggcatacatgaag
ctgcagctttcaacaggaacaatgatcatatccattcccaagattggaat
atgaagggtgctggtatgaactcatcagatagcaataactacaaaaggac
ctcatcttcagacctgtcgactatgctaatgggaagcaataccagtacta
ctagtacttcatacagcattatcagccagcaggcgaaccttgaaaaccat
catcaacaactaccaaagcttgaaaacttccttggccggcattcttttgc
ggatcatgacagcagcagtgctggccatgattacatgtttgatatgaata
atggacccggtccagttagcagtaatgttatgaatactaaaactaatagt
aacaatattgggttgtccatgatcaagacgtggctgagaaatcaaccttc
tcagccgcgcgataaccaccatcagctggagcaggagagcaagaatagta
aggagagcagaaatcaaccacagagtagtctatcgctctcaatgggtact
ggatcgcttcaaacagttactactgcaactgcaggtggtgctgctactgg
agaaactactagttcatcagataaaaatactaaacagtcaccagtggtga
cagccacaacaacaacggggactgatgcccaaactcagagtactggtggt
gctattgaggccgtgcccagaaaggccattgatacatttggccaaaggac
atctatataccgtggtgtaaccaggcacagatggacaggtagatatgaag
cccatctatgggataatagttgccgaagagaaggacaaactcgcaaggga
aggcaagtttatttgggtggttatgacaaagaagacaaagcggctagagc
ttatgacttagcagcattgaaatattggggcaccacaaccactaccaact
tcccgatcagtagctatgagaaagagattgatgaaatgaagcccatgaca
agacaggagtatgttgcatctttgaggagaaagagtagcggattttctcg
gggtgcatccatttatcgtggggtgacaaggcaccaccagcatgggagat
ggcaagcaaggattgggagagtcgcagggaacaaagatttgtacctcgga
actttcagcacccaagaggaagcagccgaggcatatgacattgctgccat
aaagttccgaggacttaatgcagtaaccaactttgacatgagcagatatg
atgtcaagtccattctggagagcagcgcattgcccatcactactggtgcc
actgcaaagcgattgaaagacgttcagcagcagcagccgcctcctcctgc
agatcatcatcatcagatcatgttgtcgtctgtgctggatcatcacggac
aggttatcagatcctcatcatcaacagaacatgacatcatgagcaatgtg
tactcagcatatggatcttatggagcccagcaggggtgcagttggccaac
tcttgcattcaaccaagcccaagctcaagcagctgctgctcctcatcaag
cgccttttgccgctggcatcaatggcatgcagttgcactactcgccgtat
ggatatggatatggtaatgcacatgcacagagggtttggtgcaagcaaga
gcaagatactaattcaaatcaggaaaggagctttcatcatcaggatgatg
atcatcttcgtcaacaactccagttgggaggtacccacaatttctttcat
gaccatgatcagcagcagcagcagcagcagcagcagactagtggccttat
gggactaatggattcttcagcagcatctatggaacacagctcaggttcaa
attctgtcatatatagtggtggagatcaccatggtaataataatgggtat
ggaagcagtactacagggactggtggtggctatataatgcccatggttat
gagtacagttgtagccaatgatgaccaaaatcaagctgatggaaataata
acaatatcaatggttttggagatggtgatgatcaggaggccaatattaag
gcgcagcagcttggttatgatcatcatcctcaaaatatgtttcttggttc
aagtagtactatagatcccgcttatcagcatcacgcaagcaacaggaact
tgtattatcatcttccagtacaggatgatcagcatgaatcgtcgtcagtg
gcagttgctactagtagtactacatgtaacatgaattgggtaccaacagc
tgttccaactcttgctcatcctacttttacagtctggaacgacacatag back to top
|
