YUC4, HQ848324.1-YUC4.m1 (mRNA) Fragaria vesca

Transcript Overview
NameYUC4
Unique NameHQ848324.1-YUC4.m1
TypemRNA
OrganismFragaria vesca (Woodland strawberry (diploid))
Sourcegenbank
ProductYUC4
Genbank Notecontains three conserved regions of canonical YUCCA FMOs (flavin-containing monooxygenases): FAD-binding motif, NADP-binding motif and 'LATGY' motif
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HQ848324.1-YUC4.m1-cds1HQ848324.1-YUC4.m1-cds1Fragaria vescaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
YUC4HQ848324.1-YUC4.p1Fragaria vescapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI325610933
nuccoreHQ848324.1
Alignments
Feature NameTypeLocationAnalysis
HQ848324 region HQ848324:513..1736+ NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>HQ848324.1-YUC4.m1 ID=HQ848324.1-YUC4.m1; Name=YUC4; organism=Fragaria vesca; type=mRNA; length=1224bp
atgggttcttgcaaagacccgaaacctaattgtgagttcgtcgaagggcc
tataatcgtaggtgcaggaccacctggtctcgcagtagctgcttgcttat
ccaaccatggcgtcccttctctgattcttgagaaaggcaactgcatagct
tctctatggcagcacaagacttacgaccgactcaaacttcatctacctaa
acagttttgccagcttcctctaatggggttccctgaagacttcccaaaat
acccaacaaagcaacagttcattaactacatggagtcctatgcttcccac
ttctcaatcaagccgagcttcaaccaggccgtccaaaacgctgcgtttga
ttcggcttcggggcattggagggttcagacccaagattttgagtacattt
cccggtggcttattgtggccaccggagaaaatgccgagccggtgattccc
gatattcatgggattgacaagtttaaaggtctaattcgtcataccagttt
gtacaaaactggcaaagatttcagaaatcaaagggttttggttattgggt
gtgggaattctggtatggaagtcagcttagacctttgcagaaacaatgca
acccctcatatggttgttaggaacactgttcatgttctaccaagggagat
gtttggcttctcaacctttcagatagcaatgacacttcttaaatggattc
cggtaaaactcgtggaccggatccttcttctggtagctagtttgactctc
ggcaacacagatcaattgggcctccgccggcctaagaccggtccaatcga
gctcaaagccgccaccggaaagaccccggtgcttgatgttggagcattgt
cactaataaaatccggcaaaataaaggtggtggaaaatgtgaaggagata
acaatcaatggagccaaatttatgaatggacaagaaaaggagtttgattc
tataatcctggcaactggatacaagagcaatgttcctacttggctcaagg
gttgtgattttttcaccaaagaaggaatgccccgagccccttgtcctagc
tgttggaaaggaagtgatggactttacacggtcggcttctccagaaaagg
cctctccggaacggcatacgacgccgtcgagatagcaaaagacattgctg
accactggaagacaagcaaagactgcaagggtagtgttgcttcttgtgat
tctcatgtcatcctactcaaatga
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protein sequence of YUC4

>HQ848324.1-YUC4.p1 ID=HQ848324.1-YUC4.p1; Name=YUC4; organism=Fragaria vesca; type=polypeptide; length=407bp
MGSCKDPKPNCEFVEGPIIVGAGPPGLAVAACLSNHGVPSLILEKGNCIA
SLWQHKTYDRLKLHLPKQFCQLPLMGFPEDFPKYPTKQQFINYMESYASH
FSIKPSFNQAVQNAAFDSASGHWRVQTQDFEYISRWLIVATGENAEPVIP
DIHGIDKFKGLIRHTSLYKTGKDFRNQRVLVIGCGNSGMEVSLDLCRNNA
TPHMVVRNTVHVLPREMFGFSTFQIAMTLLKWIPVKLVDRILLLVASLTL
GNTDQLGLRRPKTGPIELKAATGKTPVLDVGALSLIKSGKIKVVENVKEI
TINGAKFMNGQEKEFDSIILATGYKSNVPTWLKGCDFFTKEGMPRAPCPS
CWKGSDGLYTVGFSRKGLSGTAYDAVEIAKDIADHWKTSKDCKGSVASCD
SHVILLK
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mRNA from alignment at HQ848324:513..1736+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HQ848324.1-YUC4.m1 ID=HQ848324.1-YUC4.m1; Name=YUC4; organism=Fragaria vesca; type=mRNA; length=1224bp; location=Sequence derived from: HQ848324:513..1736+ (Fragaria vesca
atgggttcttgcaaagacccgaaacctaattgtgagttcgtcgaagggcc
tataatcgtaggtgcaggaccacctggtctcgcagtagctgcttgcttat
ccaaccatggcgtcccttctctgattcttgagaaaggcaactgcatagct
tctctatggcagcacaagacttacgaccgactcaaacttcatctacctaa
acagttttgccagcttcctctaatggggttccctgaagacttcccaaaat
acccaacaaagcaacagttcattaactacatggagtcctatgcttcccac
ttctcaatcaagccgagcttcaaccaggccgtccaaaacgctgcgtttga
ttcggcttcggggcattggagggttcagacccaagattttgagtacattt
cccggtggcttattgtggccaccggagaaaatgccgagccggtgattccc
gatattcatgggattgacaagtttaaaggtctaattcgtcataccagttt
gtacaaaactggcaaagatttcagaaatcaaagggttttggttattgggt
gtgggaattctggtatggaagtcagcttagacctttgcagaaacaatgca
acccctcatatggttgttaggaacactgttcatgttctaccaagggagat
gtttggcttctcaacctttcagatagcaatgacacttcttaaatggattc
cggtaaaactcgtggaccggatccttcttctggtagctagtttgactctc
ggcaacacagatcaattgggcctccgccggcctaagaccggtccaatcga
gctcaaagccgccaccggaaagaccccggtgcttgatgttggagcattgt
cactaataaaatccggcaaaataaaggtggtggaaaatgtgaaggagata
acaatcaatggagccaaatttatgaatggacaagaaaaggagtttgattc
tataatcctggcaactggatacaagagcaatgttcctacttggctcaagg
gttgtgattttttcaccaaagaaggaatgccccgagccccttgtcctagc
tgttggaaaggaagtgatggactttacacggtcggcttctccagaaaagg
cctctccggaacggcatacgacgccgtcgagatagcaaaagacattgctg
accactggaagacaagcaaagactgcaagggtagtgttgcttcttgtgat
tctcatgtcatcctactcaaatga
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Coding sequence (CDS) from alignment at HQ848324:513..1736+

>HQ848324.1-YUC4.m1 ID=HQ848324.1-YUC4.m1; Name=YUC4; organism=Fragaria vesca; type=CDS; length=1224bp; location=Sequence derived from: HQ848324:513..1736+ (Fragaria vesca
atgggttcttgcaaagacccgaaacctaattgtgagttcgtcgaagggcc
tataatcgtaggtgcaggaccacctggtctcgcagtagctgcttgcttat
ccaaccatggcgtcccttctctgattcttgagaaaggcaactgcatagct
tctctatggcagcacaagacttacgaccgactcaaacttcatctacctaa
acagttttgccagcttcctctaatggggttccctgaagacttcccaaaat
acccaacaaagcaacagttcattaactacatggagtcctatgcttcccac
ttctcaatcaagccgagcttcaaccaggccgtccaaaacgctgcgtttga
ttcggcttcggggcattggagggttcagacccaagattttgagtacattt
cccggtggcttattgtggccaccggagaaaatgccgagccggtgattccc
gatattcatgggattgacaagtttaaaggtctaattcgtcataccagttt
gtacaaaactggcaaagatttcagaaatcaaagggttttggttattgggt
gtgggaattctggtatggaagtcagcttagacctttgcagaaacaatgca
acccctcatatggttgttaggaacactgttcatgttctaccaagggagat
gtttggcttctcaacctttcagatagcaatgacacttcttaaatggattc
cggtaaaactcgtggaccggatccttcttctggtagctagtttgactctc
ggcaacacagatcaattgggcctccgccggcctaagaccggtccaatcga
gctcaaagccgccaccggaaagaccccggtgcttgatgttggagcattgt
cactaataaaatccggcaaaataaaggtggtggaaaatgtgaaggagata
acaatcaatggagccaaatttatgaatggacaagaaaaggagtttgattc
tataatcctggcaactggatacaagagcaatgttcctacttggctcaagg
gttgtgattttttcaccaaagaaggaatgccccgagccccttgtcctagc
tgttggaaaggaagtgatggactttacacggtcggcttctccagaaaagg
cctctccggaacggcatacgacgccgtcgagatagcaaaagacattgctg
accactggaagacaagcaaagactgcaagggtagtgttgcttcttgtgat
tctcatgtcatcctactcaaatga
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