PSBA, JX118252.1-PSBA.m1 (mRNA) Fragaria chinensis

Transcript Overview
NamePSBA
Unique NameJX118252.1-PSBA.m1
TypemRNA
OrganismFragaria chinensis ()
Sourcegenbank
Productphotosystem II protein A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PSBAJX118252.1-PSBAFragaria chinensisgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JX118252.1-PSBA.m1-cds1JX118252.1-PSBA.m1-cds1Fragaria chinensisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
PSBAJX118252.1-PSBA.p1Fragaria chinensispolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI402239511
nuccoreJX118252.1
Alignments
Feature NameTypeLocationAnalysis
JX118252 region JX118252:85..1146- NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>JX118252.1-PSBA.m1 ID=JX118252.1-PSBA.m1; Name=PSBA; organism=Fragaria chinensis; type=mRNA; length=1062bp
atgactgcaattttagagagacgcgaaagcgaaagcctatggggtcgctt
ttgtaattggataaccagcaccgaaaaccgtctttacattggatggtttg
gtgttttgatgatccctactttattgaccgcaacttctgtatttattatt
gctttcattgctgcacctccggtagatattgatggtattcgtgaacctgt
ttctggatctttactttacggaaacaatattatttccggtgccattatcc
ctacttctgcagctataggtttgcacttttacccaatatgggaagcggct
tctgttgatgaatggttatacaacggtggcccttatgagctaattgttct
acacttcttacttggtgtagcttgctatatgggtcgtgagtgggaactta
gtttccgtctgggtatgcgcccttggattgctgttgcatattcagctcct
gttgcagctgctactgctgttttcttgatctacccaattggtcaaggaag
cttttctgacggtatgcctctaggaatctctggtactttcaacttcatga
ttgtattccaagctgagcacaacatccttatgcacccatttcacatgcta
ggtgtggctggtgtatttggcggttccctattcagtgctatgcatggttc
tttggtaacctctagtttgatcagggaaaccacagaaaatgaatctgcta
atgaaggttacagattcggtcaagaggaagaaacctataatatcgtagcc
gctcatggttattttggccgattgatcttccaatatgctagtttcaacaa
ttctcgttctttacacttcttcttagctgcttggcctgtagtaggtatct
ggttcaccgctttaggtatcagcactatggctttcaacttaaatggtttt
aatttcaatcaatctgtagttgatagtcaaggtcgtgtaattaatacttg
ggctgatattatcaaccgcgctaatcttggtatggaagttatgcatgaac
gtaatgctcataatttccctctagacctagctgctgttgaagttccgtct
atcaatggatan
back to top

protein sequence of PSBA

>JX118252.1-PSBA.p1 ID=JX118252.1-PSBA.p1; Name=PSBA; organism=Fragaria chinensis; type=polypeptide; length=354bp
MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFII
AFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAP
VAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHML
GVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVA
AHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPS
INGX
back to top

mRNA from alignment at JX118252:85..1146-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JX118252.1-PSBA.m1 ID=JX118252.1-PSBA.m1; Name=PSBA; organism=Fragaria chinensis; type=mRNA; length=1062bp; location=Sequence derived from: JX118252:85..1146- (Fragaria chinensis
ATGACTGCAATTTTAGAGAGACGCGAAAGCGAAAGCCTATGGGGTCGCTT
TTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTG
GTGTTTTGATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATT
GCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTATTCGTGAACCTGT
TTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTATCC
CTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCT
TCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCT
ACACTTCTTACTTGGTGTAGCTTGCTATATGGGTCGTGAGTGGGAACTTA
GTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCT
GTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAG
CTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGA
TTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTA
GGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTC
TTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTA
ATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCC
GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAA
TTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCT
GGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTT
AATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTG
GGCTGATATTATCAACCGCGCTAATCTTGGTATGGAAGTTATGCATGAAC
GTAATGCTCATAATTTCCCTCTAGACCTAGCTGCTGTTGAAGTTCCGTCT
ATCAATGGATAN
back to top

Coding sequence (CDS) from alignment at JX118252:85..1146-

>JX118252.1-PSBA.m1 ID=JX118252.1-PSBA.m1; Name=PSBA; organism=Fragaria chinensis; type=CDS; length=1062bp; location=Sequence derived from: JX118252:85..1146- (Fragaria chinensis
ATGACTGCAATTTTAGAGAGACGCGAAAGCGAAAGCCTATGGGGTCGCTT
TTGTAATTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTG
GTGTTTTGATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTATT
GCTTTCATTGCTGCACCTCCGGTAGATATTGATGGTATTCGTGAACCTGT
TTCTGGATCTTTACTTTACGGAAACAATATTATTTCCGGTGCCATTATCC
CTACTTCTGCAGCTATAGGTTTGCACTTTTACCCAATATGGGAAGCGGCT
TCTGTTGATGAATGGTTATACAACGGTGGCCCTTATGAGCTAATTGTTCT
ACACTTCTTACTTGGTGTAGCTTGCTATATGGGTCGTGAGTGGGAACTTA
GTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCT
GTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAG
CTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGA
TTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTA
GGTGTGGCTGGTGTATTTGGCGGTTCCCTATTCAGTGCTATGCATGGTTC
TTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTA
ATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCC
GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAA
TTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCT
GGTTCACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTT
AATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTG
GGCTGATATTATCAACCGCGCTAATCTTGGTATGGAAGTTATGCATGAAC
GTAATGCTCATAATTTCCCTCTAGACCTAGCTGCTGTTGAAGTTCCGTCT
ATCAATGGATAN
back to top