NDHD, JX118224.1-NDHD.m2 (mRNA) Fragaria nilgerrensis

Transcript Overview
NameNDHD
Unique NameJX118224.1-NDHD.m2
TypemRNA
OrganismFragaria nilgerrensis ()
Sourcegenbank
ProductNADH-plastoquinone oxidoreductase subunit 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NDHDJX118224.1-NDHDFragaria nilgerrensisgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JX118224.1-NDHD.m2-cds1JX118224.1-NDHD.m2-cds1Fragaria nilgerrensisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NDHDJX118224.1-NDHD.p2Fragaria nilgerrensispolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI402239431
nuccoreJX118224.1
Alignments
Feature NameTypeLocationAnalysis
JX118224 region JX118224:1352..2854- NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>JX118224.1-NDHD.m2 ID=JX118224.1-NDHD.m2; Name=NDHD; organism=Fragaria nilgerrensis; type=mRNA; length=1503bp
atgaataattttccttggttaacgctagttnnnnnnnnnnnnnnnnnnnn
nnnnnccttaattttctttcttcctcatcgaggaaataaggtaatacggt
ggtatactttatgtatatgcataatagaactccttctaacaacctatgca
ttcagttatcgtttccaattggatgatccgttaatgcaactaacggagaa
ttataaatggatcaatttttttgatttttactggagattgggaatagatg
gaatttctataggacccattttactgacaggatttattacaactttagct
actttagcggcttggcccgttactcgagattcccgactattccatttcct
aatgttagcaatgtatagcggtcaaataggaccattttcttctcaagacc
ttttactttttttcatcatgtgggagttagaattaattcccgtttatcta
cttctatccatgtgggggggaaagaaacgtttgtattcagctacaaaatt
tattttgtacactgccggaggttctgtttttttattaataggagttctgg
gtattggtttatatggctccaatgaaccgacattaaattttgaaacatca
gcgaatcaatcatatcctgtagcactggaaataatattctatattggatt
tcttattgcttttgctgtcaaatcaccgatcatacccctacacacatggt
taccagatacccatggagaggcacattatagtacttgtatgcttttagcc
ggaatcttattaaaaatgggagcgtatgggttgattcgaatcaatatgga
attattaccccacgcccattctatattttctccctggttgatgatagtcg
gcacaattcaaattatctatgcagctttaacatctcctggccagcgtaat
ttaaaaaaaagaatagcctattcttctgtatctcatatgggtttcataat
tataggaattggttctataagcgatacagggctcaatgggactattttac
aaataatttctcacggatttattggcgctgcgctttttttcttggccgga
acgagttatgatagaatacgacttgtttatctcgacgaaatgggcggaat
ggctatctcaattccaaaaatattcacgactttcagtatcttatcaatgg
cttcgcttgcattaccgggcatgagcggttttgttgccgaattgatagtt
ttttttggaatacttactagccaaaaatatcttttaatgacaaaaatatt
aattacttttgtaatggcaattggaatgatattaactcctatttattcat
tatctatgttacgccagatgttctatggatacaagctttttaatgcccca
aattcttatttttttgattctggaccgcgagagttatttatttcgatttc
tatccttttacctgtaataggtattggtatttatcccgatttcgttttct
cattatcagttgacaaggccgaagctattctatcaaattttttttataga
tag
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protein sequence of NDHD

>JX118224.1-NDHD.p2 ID=JX118224.1-NDHD.p2; Name=NDHD; organism=Fragaria nilgerrensis; type=polypeptide; length=500bp
MNNFPWLTLVXXXXXXXXXLIFFLPHRGNKVIRWYTLCICIIELLLTTYA
FSYRFQLDDPLMQLTENYKWINFFDFYWRLGIDGISIGPILLTGFITTLA
TLAAWPVTRDSRLFHFLMLAMYSGQIGPFSSQDLLLFFIMWELELIPVYL
LLSMWGGKKRLYSATKFILYTAGGSVFLLIGVLGIGLYGSNEPTLNFETS
ANQSYPVALEIIFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLA
GILLKMGAYGLIRINMELLPHAHSIFSPWLMIVGTIQIIYAALTSPGQRN
LKKRIAYSSVSHMGFIIIGIGSISDTGLNGTILQIISHGFIGAALFFLAG
TSYDRIRLVYLDEMGGMAISIPKIFTTFSILSMASLALPGMSGFVAELIV
FFGILTSQKYLLMTKILITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAP
NSYFFDSGPRELFISISILLPVIGIGIYPDFVFSLSVDKAEAILSNFFYR
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mRNA from alignment at JX118224:1352..2854-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JX118224.1-NDHD.m2 ID=JX118224.1-NDHD.m2; Name=NDHD; organism=Fragaria nilgerrensis; type=mRNA; length=1503bp; location=Sequence derived from: JX118224:1352..2854- (Fragaria nilgerrensis
ATGAATAATTTTCCTTGGTTAACGCTAGTTNNNNNNNNNNNNNNNNNNNN
NNNNNCCTTAATTTTCTTTCTTCCTCATCGAGGAAATAAGGTAATACGGT
GGTATACTTTATGTATATGCATAATAGAACTCCTTCTAACAACCTATGCA
TTCAGTTATCGTTTCCAATTGGATGATCCGTTAATGCAACTAACGGAGAA
TTATAAATGGATCAATTTTTTTGATTTTTACTGGAGATTGGGAATAGATG
GAATTTCTATAGGACCCATTTTACTGACAGGATTTATTACAACTTTAGCT
ACTTTAGCGGCTTGGCCCGTTACTCGAGATTCCCGACTATTCCATTTCCT
AATGTTAGCAATGTATAGCGGTCAAATAGGACCATTTTCTTCTCAAGACC
TTTTACTTTTTTTCATCATGTGGGAGTTAGAATTAATTCCCGTTTATCTA
CTTCTATCCATGTGGGGGGGAAAGAAACGTTTGTATTCAGCTACAAAATT
TATTTTGTACACTGCCGGAGGTTCTGTTTTTTTATTAATAGGAGTTCTGG
GTATTGGTTTATATGGCTCCAATGAACCGACATTAAATTTTGAAACATCA
GCGAATCAATCATATCCTGTAGCACTGGAAATAATATTCTATATTGGATT
TCTTATTGCTTTTGCTGTCAAATCACCGATCATACCCCTACACACATGGT
TACCAGATACCCATGGAGAGGCACATTATAGTACTTGTATGCTTTTAGCC
GGAATCTTATTAAAAATGGGAGCGTATGGGTTGATTCGAATCAATATGGA
ATTATTACCCCACGCCCATTCTATATTTTCTCCCTGGTTGATGATAGTCG
GCACAATTCAAATTATCTATGCAGCTTTAACATCTCCTGGCCAGCGTAAT
TTAAAAAAAAGAATAGCCTATTCTTCTGTATCTCATATGGGTTTCATAAT
TATAGGAATTGGTTCTATAAGCGATACAGGGCTCAATGGGACTATTTTAC
AAATAATTTCTCACGGATTTATTGGCGCTGCGCTTTTTTTCTTGGCCGGA
ACGAGTTATGATAGAATACGACTTGTTTATCTCGACGAAATGGGCGGAAT
GGCTATCTCAATTCCAAAAATATTCACGACTTTCAGTATCTTATCAATGG
CTTCGCTTGCATTACCGGGCATGAGCGGTTTTGTTGCCGAATTGATAGTT
TTTTTTGGAATACTTACTAGCCAAAAATATCTTTTAATGACAAAAATATT
AATTACTTTTGTAATGGCAATTGGAATGATATTAACTCCTATTTATTCAT
TATCTATGTTACGCCAGATGTTCTATGGATACAAGCTTTTTAATGCCCCA
AATTCTTATTTTTTTGATTCTGGACCGCGAGAGTTATTTATTTCGATTTC
TATCCTTTTACCTGTAATAGGTATTGGTATTTATCCCGATTTCGTTTTCT
CATTATCAGTTGACAAGGCCGAAGCTATTCTATCAAATTTTTTTTATAGA
TAG
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Coding sequence (CDS) from alignment at JX118224:1352..2854-

>JX118224.1-NDHD.m2 ID=JX118224.1-NDHD.m2; Name=NDHD; organism=Fragaria nilgerrensis; type=CDS; length=1503bp; location=Sequence derived from: JX118224:1352..2854- (Fragaria nilgerrensis
ATGAATAATTTTCCTTGGTTAACGCTAGTTNNNNNNNNNNNNNNNNNNNN
NNNNNCCTTAATTTTCTTTCTTCCTCATCGAGGAAATAAGGTAATACGGT
GGTATACTTTATGTATATGCATAATAGAACTCCTTCTAACAACCTATGCA
TTCAGTTATCGTTTCCAATTGGATGATCCGTTAATGCAACTAACGGAGAA
TTATAAATGGATCAATTTTTTTGATTTTTACTGGAGATTGGGAATAGATG
GAATTTCTATAGGACCCATTTTACTGACAGGATTTATTACAACTTTAGCT
ACTTTAGCGGCTTGGCCCGTTACTCGAGATTCCCGACTATTCCATTTCCT
AATGTTAGCAATGTATAGCGGTCAAATAGGACCATTTTCTTCTCAAGACC
TTTTACTTTTTTTCATCATGTGGGAGTTAGAATTAATTCCCGTTTATCTA
CTTCTATCCATGTGGGGGGGAAAGAAACGTTTGTATTCAGCTACAAAATT
TATTTTGTACACTGCCGGAGGTTCTGTTTTTTTATTAATAGGAGTTCTGG
GTATTGGTTTATATGGCTCCAATGAACCGACATTAAATTTTGAAACATCA
GCGAATCAATCATATCCTGTAGCACTGGAAATAATATTCTATATTGGATT
TCTTATTGCTTTTGCTGTCAAATCACCGATCATACCCCTACACACATGGT
TACCAGATACCCATGGAGAGGCACATTATAGTACTTGTATGCTTTTAGCC
GGAATCTTATTAAAAATGGGAGCGTATGGGTTGATTCGAATCAATATGGA
ATTATTACCCCACGCCCATTCTATATTTTCTCCCTGGTTGATGATAGTCG
GCACAATTCAAATTATCTATGCAGCTTTAACATCTCCTGGCCAGCGTAAT
TTAAAAAAAAGAATAGCCTATTCTTCTGTATCTCATATGGGTTTCATAAT
TATAGGAATTGGTTCTATAAGCGATACAGGGCTCAATGGGACTATTTTAC
AAATAATTTCTCACGGATTTATTGGCGCTGCGCTTTTTTTCTTGGCCGGA
ACGAGTTATGATAGAATACGACTTGTTTATCTCGACGAAATGGGCGGAAT
GGCTATCTCAATTCCAAAAATATTCACGACTTTCAGTATCTTATCAATGG
CTTCGCTTGCATTACCGGGCATGAGCGGTTTTGTTGCCGAATTGATAGTT
TTTTTTGGAATACTTACTAGCCAAAAATATCTTTTAATGACAAAAATATT
AATTACTTTTGTAATGGCAATTGGAATGATATTAACTCCTATTTATTCAT
TATCTATGTTACGCCAGATGTTCTATGGATACAAGCTTTTTAATGCCCCA
AATTCTTATTTTTTTGATTCTGGACCGCGAGAGTTATTTATTTCGATTTC
TATCCTTTTACCTGTAATAGGTATTGGTATTTATCCCGATTTCGTTTTCT
CATTATCAGTTGACAAGGCCGAAGCTATTCTATCAAATTTTTTTTATAGA
TAG
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