RBCL, JX118094.1-RBCL.m2 (mRNA) Fragaria virginiana

Transcript Overview


Name	RBCL
Unique Name	JX118094.1-RBCL.m2
Type	mRNA
Organism	Fragaria virginiana ()
Source	genbank
Product	ribulose 1,5-bisphosphate carboxylase/oxygenase

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
RBCL	JX118094.1-RBCL	Fragaria virginiana	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
JX118094.1-RBCL.m2-cds1	JX118094.1-RBCL.m2-cds1	Fragaria virginiana	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
RBCL	JX118094.1-RBCL.p2	Fragaria virginiana	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	402238952
nuccore	JX118094.1

Alignments

Feature Name	Type	Location	Analysis
JX118094	region	JX118094:1220..2647+	NCBI Rosaceae gene and mRNA sequences

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at JX118094:1220..2647+
coding sequence from alignment at JX118094:1220..2647+

mRNA sequence

>JX118094.1-RBCL.m2 ID=JX118094.1-RBCL.m2; Name=RBCL; organism=Fragaria virginiana; type=mRNA; length=1428bp
atgtcaccacaaacagagactaaagcaagtgttggattcaaagctggtgt
taaagattataaattgacttattatactccggactatgaaaccaaagata
ctgatatattggcagcatttcgagtaactcctcaacctggagttccgcct
gaggaagcaggggcagcggtagctgcggaatcttctactggtacatggac
aactgtatggactgacgggcttaccagtcttgatcgttacaaagggcgat
gctaccacatcgaacctgttcctggagaagaaagtcaatttattgcttat
gtagcttaccccttagacctttttgaagagggttcggttactaacatgtt
tacttcgattgtaggtaatgtgtttgggttcaaggccttgcgcgctctac
gtctggaggatttacgaatccctactgcttatgttaaaactttccaaggc
ccgcctcacgggatccaagttgaaagagataaattgaacaagtatggccg
ccccctattgggatgtactattaaacctaaattggggttatccgctaaga
attacggtagagcagtttatgaatgtctccgcggtggacttgattttacc
aaagatgatgagaatgttaattcccaaccatttatgcgttggagagaccg
tttcttattttgtgccgaagcaatttataaatcgcaggctgaaacaggtg
aaatcaaagggcattatttgaatgctactgcaggtacatgcgaagatatg
atgaaaagagccgtatttgccagagaattgggagttcctatcgtaatgca
tgattacttaacggggggattcactgcaaatactaccttggctcattatt
gccgagacaacggtctacttcttcacatccaccgtgcaatgcatgctgtt
attgatagacagaagaatcatggtatgcactttcgtgtactagctaaagc
attacgtatgtctggtggagatcatatacacgctggtaccgtagtaggta
agcttgagggggaaagagaaataactttaggctttgttgatttactacgt
gatgattttattgaaaaggatcgaagccgcggtatttatttcactcaaga
ttgggtttctttaccgggtgttttaccggtggcttccggcggtattcacg
tttggcatatgcctgctctgaccgagatctttggagatgattctgtacta
caattcggtggaggaactttaggacacccttggggaaatgcacctggtgc
cgtagctaatcgagtagctctagaagcatgtgtacaagcccgtaatgagg
gacgtgatctcgctcgtgagggtaatgacattattcgtgaggcttgtaaa
tggagtcctgaactagctgctgcttgtgaagtatggaaagagatcaaatt
tgaattcgaagcaatggatactttgtaa

protein sequence of RBCL

>JX118094.1-RBCL.p2 ID=JX118094.1-RBCL.p2; Name=RBCL; organism=Fragaria virginiana; type=polypeptide; length=475bp
MSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPP
EEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEESQFIAY
VAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQG
PPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFT
KDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTCEDM
MKRAVFARELGVPIVMHDYLTGGFTANTTLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREITLGFVDLLR
DDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVL
QFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNDIIREACK
WSPELAAACEVWKEIKFEFEAMDTL

mRNA from alignment at JX118094:1220..2647+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>JX118094.1-RBCL.m2 ID=JX118094.1-RBCL.m2; Name=RBCL; organism=Fragaria virginiana; type=mRNA; length=1428bp; location=Sequence derived from: JX118094:1220..2647+ (Fragaria virginiana
atgtcaccacaaacagagactaaagcaagtgttggattcaaagctggtgt
taaagattataaattgacttattatactccggactatgaaaccaaagata
ctgatatattggcagcatttcgagtaactcctcaacctggagttccgcct
gaggaagcaggggcagcggtagctgcggaatcttctactggtacatggac
aactgtatggactgacgggcttaccagtcttgatcgttacaaagggcgat
gctaccacatcgaacctgttcctggagaagaaagtcaatttattgcttat
gtagcttaccccttagacctttttgaagagggttcggttactaacatgtt
tacttcgattgtaggtaatgtgtttgggttcaaggccttgcgcgctctac
gtctggaggatttacgaatccctactgcttatgttaaaactttccaaggc
ccgcctcacgggatccaagttgaaagagataaattgaacaagtatggccg
ccccctattgggatgtactattaaacctaaattggggttatccgctaaga
attacggtagagcagtttatgaatgtctccgcggtggacttgattttacc
aaagatgatgagaatgttaattcccaaccatttatgcgttggagagaccg
tttcttattttgtgccgaagcaatttataaatcgcaggctgaaacaggtg
aaatcaaagggcattatttgaatgctactgcaggtacatgcgaagatatg
atgaaaagagccgtatttgccagagaattgggagttcctatcgtaatgca
tgattacttaacggggggattcactgcaaatactaccttggctcattatt
gccgagacaacggtctacttcttcacatccaccgtgcaatgcatgctgtt
attgatagacagaagaatcatggtatgcactttcgtgtactagctaaagc
attacgtatgtctggtggagatcatatacacgctggtaccgtagtaggta
agcttgagggggaaagagaaataactttaggctttgttgatttactacgt
gatgattttattgaaaaggatcgaagccgcggtatttatttcactcaaga
ttgggtttctttaccgggtgttttaccggtggcttccggcggtattcacg
tttggcatatgcctgctctgaccgagatctttggagatgattctgtacta
caattcggtggaggaactttaggacacccttggggaaatgcacctggtgc
cgtagctaatcgagtagctctagaagcatgtgtacaagcccgtaatgagg
gacgtgatctcgctcgtgagggtaatgacattattcgtgaggcttgtaaa
tggagtcctgaactagctgctgcttgtgaagtatggaaagagatcaaatt
tgaattcgaagcaatggatactttgtaa

Coding sequence (CDS) from alignment at JX118094:1220..2647+

>JX118094.1-RBCL.m2 ID=JX118094.1-RBCL.m2; Name=RBCL; organism=Fragaria virginiana; type=CDS; length=1428bp; location=Sequence derived from: JX118094:1220..2647+ (Fragaria virginiana
atgtcaccacaaacagagactaaagcaagtgttggattcaaagctggtgt
taaagattataaattgacttattatactccggactatgaaaccaaagata
ctgatatattggcagcatttcgagtaactcctcaacctggagttccgcct
gaggaagcaggggcagcggtagctgcggaatcttctactggtacatggac
aactgtatggactgacgggcttaccagtcttgatcgttacaaagggcgat
gctaccacatcgaacctgttcctggagaagaaagtcaatttattgcttat
gtagcttaccccttagacctttttgaagagggttcggttactaacatgtt
tacttcgattgtaggtaatgtgtttgggttcaaggccttgcgcgctctac
gtctggaggatttacgaatccctactgcttatgttaaaactttccaaggc
ccgcctcacgggatccaagttgaaagagataaattgaacaagtatggccg
ccccctattgggatgtactattaaacctaaattggggttatccgctaaga
attacggtagagcagtttatgaatgtctccgcggtggacttgattttacc
aaagatgatgagaatgttaattcccaaccatttatgcgttggagagaccg
tttcttattttgtgccgaagcaatttataaatcgcaggctgaaacaggtg
aaatcaaagggcattatttgaatgctactgcaggtacatgcgaagatatg
atgaaaagagccgtatttgccagagaattgggagttcctatcgtaatgca
tgattacttaacggggggattcactgcaaatactaccttggctcattatt
gccgagacaacggtctacttcttcacatccaccgtgcaatgcatgctgtt
attgatagacagaagaatcatggtatgcactttcgtgtactagctaaagc
attacgtatgtctggtggagatcatatacacgctggtaccgtagtaggta
agcttgagggggaaagagaaataactttaggctttgttgatttactacgt
gatgattttattgaaaaggatcgaagccgcggtatttatttcactcaaga
ttgggtttctttaccgggtgttttaccggtggcttccggcggtattcacg
tttggcatatgcctgctctgaccgagatctttggagatgattctgtacta
caattcggtggaggaactttaggacacccttggggaaatgcacctggtgc
cgtagctaatcgagtagctctagaagcatgtgtacaagcccgtaatgagg
gacgtgatctcgctcgtgagggtaatgacattattcgtgaggcttgtaaa
tggagtcctgaactagctgctgcttgtgaagtatggaaagagatcaaatt
tgaattcgaagcaatggatactttgtaa