ATPB, JX118087.1-ATPB.m5 (mRNA) Fragaria corymbosa

Transcript Overview


Name	ATPB
Unique Name	JX118087.1-ATPB.m5
Type	mRNA
Organism	Fragaria corymbosa ()
Source	genbank
Product	ATP synthase CF1 beta subunit

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
JX118087	region	JX118087:5239..6039 -	NCBI Rosaceae gene and mRNA sequences	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ATPB	JX118087.1-ATPB	Fragaria corymbosa	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
JX118087.1-ATPB.m5-cds1	JX118087.1-ATPB.m5-cds1	Fragaria corymbosa	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ATPB	JX118087.1-ATPB.p5	Fragaria corymbosa	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	402238924
nuccore	JX118087.1

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at JX118087:5239..6039-
coding sequence from alignment at JX118087:5239..6039-

mRNA sequence

>JX118087.1-ATPB.m5 ID=JX118087.1-ATPB.m5; Name=ATPB; organism=Fragaria corymbosa; type=mRNA; length=801bp
attgccgaatcaaaagtggctctagtctatggtcagatgaatgaaccgcc
cggagctcgtatgagggttggtttaaccgccctaactatggcggaatatt
tccgagatgttaatgaacaagacgtacttctatttatcgacaatatcttc
cgttttgtccaagcaggatccgaagtatccgctttattgggcagaatgcc
ttccgctgtgggttatcaaccgacccttagtaccgaaatgggctctttac
aagaaagaattacttctactaaagaagggtccataacttctattcaagca
gtttatgtacctgcggacgatttgaccgatcctgctccggccacgacatt
tgcacatttagatgctactaccgtactatcaagaggattagctgccaaag
gtatctatccagcagtggatcctttagattcaacatcaactatgctccaa
cctcggattgttggtgaagaacattatgaanctgcgcaaagagttaaaga
aactttacaacgttacaaagaacttcaggacattatagctatccttgggt
tagacgaattatccgaagacgatcgcttaaccgtagcaagagcacgaaaa
attgagcgtttcttatcacaaccctttttcgtagcagaagtatttacagg
ttccccaggaaaatatgttggtctagcagaaacaattagaggttttaaat
tgatcctttctggagaattagatggtcttcctgagcaggccttttattta
gtaggtaacatcgatgaagctactgcgaaagctacgaccttagaaactta
g

protein sequence of ATPB

>JX118087.1-ATPB.p5 ID=JX118087.1-ATPB.p5; Name=ATPB; organism=Fragaria corymbosa; type=polypeptide; length=266bp
IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF
RFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQA
VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQ
PRIVGEEHYEXAQRVKETLQRYKELQDIIAILGLDELSEDDRLTVARARK
IERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYL
VGNIDEATAKATTLET

mRNA from alignment at JX118087:5239..6039-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>JX118087.1-ATPB.m5 ID=JX118087.1-ATPB.m5; Name=ATPB; organism=Fragaria corymbosa; type=mRNA; length=801bp; location=Sequence derived from: JX118087:5239..6039- (Fragaria corymbosa
ATTGCCGAATCAAAAGTGGCTCTAGTCTATGGTCAGATGAATGAACCGCC
CGGAGCTCGTATGAGGGTTGGTTTAACCGCCCTAACTATGGCGGAATATT
TCCGAGATGTTAATGAACAAGACGTACTTCTATTTATCGACAATATCTTC
CGTTTTGTCCAAGCAGGATCCGAAGTATCCGCTTTATTGGGCAGAATGCC
TTCCGCTGTGGGTTATCAACCGACCCTTAGTACCGAAATGGGCTCTTTAC
AAGAAAGAATTACTTCTACTAAAGAAGGGTCCATAACTTCTATTCAAGCA
GTTTATGTACCTGCGGACGATTTGACCGATCCTGCTCCGGCCACGACATT
TGCACATTTAGATGCTACTACCGTACTATCAAGAGGATTAGCTGCCAAAG
GTATCTATCCAGCAGTGGATCCTTTAGATTCAACATCAACTATGCTCCAA
CCTCGGATTGTTGGTGAAGAACATTATGAANCTGCGCAAAGAGTTAAAGA
AACTTTACAACGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGT
TAGACGAATTATCCGAAGACGATCGCTTAACCGTAGCAAGAGCACGAAAA
ATTGAGCGTTTCTTATCACAACCCTTTTTCGTAGCAGAAGTATTTACAGG
TTCCCCAGGAAAATATGTTGGTCTAGCAGAAACAATTAGAGGTTTTAAAT
TGATCCTTTCTGGAGAATTAGATGGTCTTCCTGAGCAGGCCTTTTATTTA
GTAGGTAACATCGATGAAGCTACTGCGAAAGCTACGACCTTAGAAACTTA
G

Coding sequence (CDS) from alignment at JX118087:5239..6039-

>JX118087.1-ATPB.m5 ID=JX118087.1-ATPB.m5; Name=ATPB; organism=Fragaria corymbosa; type=CDS; length=801bp; location=Sequence derived from: JX118087:5239..6039- (Fragaria corymbosa
ATTGCCGAATCAAAAGTGGCTCTAGTCTATGGTCAGATGAATGAACCGCC
CGGAGCTCGTATGAGGGTTGGTTTAACCGCCCTAACTATGGCGGAATATT
TCCGAGATGTTAATGAACAAGACGTACTTCTATTTATCGACAATATCTTC
CGTTTTGTCCAAGCAGGATCCGAAGTATCCGCTTTATTGGGCAGAATGCC
TTCCGCTGTGGGTTATCAACCGACCCTTAGTACCGAAATGGGCTCTTTAC
AAGAAAGAATTACTTCTACTAAAGAAGGGTCCATAACTTCTATTCAAGCA
GTTTATGTACCTGCGGACGATTTGACCGATCCTGCTCCGGCCACGACATT
TGCACATTTAGATGCTACTACCGTACTATCAAGAGGATTAGCTGCCAAAG
GTATCTATCCAGCAGTGGATCCTTTAGATTCAACATCAACTATGCTCCAA
CCTCGGATTGTTGGTGAAGAACATTATGAANCTGCGCAAAGAGTTAAAGA
AACTTTACAACGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGT
TAGACGAATTATCCGAAGACGATCGCTTAACCGTAGCAAGAGCACGAAAA
ATTGAGCGTTTCTTATCACAACCCTTTTTCGTAGCAGAAGTATTTACAGG
TTCCCCAGGAAAATATGTTGGTCTAGCAGAAACAATTAGAGGTTTTAAAT
TGATCCTTTCTGGAGAATTAGATGGTCTTCCTGAGCAGGCCTTTTATTTA
GTAGGTAACATCGATGAAGCTACTGCGAAAGCTACGACCTTAGAAACTTA
G