RPOC1, JX118016.1-RPOC1.m2 (mRNA) Fragaria viridis

Transcript Overview
NameRPOC1
Unique NameJX118016.1-RPOC1.m2
TypemRNA
OrganismFragaria viridis ()
Sourcegenbank
ProductRNA polymerase beta subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPOC1JX118016.1-RPOC1Fragaria viridisgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JX118016.1-RPOC1.m2-cds1JX118016.1-RPOC1.m2-cds1Fragaria viridisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
RPOC1JX118016.1-RPOC1.p2Fragaria viridispolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI402238729
nuccoreJX118016.1
Alignments
Feature NameTypeLocationAnalysis
JX118016 region JX118016:1458..2065- NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>JX118016.1-RPOC1.m2 ID=JX118016.1-RPOC1.m2; Name=RPOC1; organism=Fragaria viridis; type=mRNA; length=608bp
atccattagtttgtaagggatttaacgcagactttgatggggatcaaatg
gctgttcatgtacctttatctttggaggctcaggcggaggcccgtttact
tatgttttctcatatgaatctcttgtctccagctattggggatcctattt
ccgtaccaacccaagatatgcttatcgggctctatgtattaacgagcggg
aatcgccgaggtatttgtgcaaataggtataatccatgtaatcgcacaaa
ttctaaaaatgaaaggattgccgataataattataaatatacgaacgaac
cctttttttgtaattcctatgatgcaattggagcttatcggcagaaaaga
atccatttagatagtcccttgtggctccgatggcagctagatcaacgtgt
tattacttcaagagaaactcccatcgaagttcactatgaatctttgggta
cctctcatgagatttatgggcactatgtaatagtaagaagtataaaaaaa
gaagttctttgtatatatgttcgaaccacagttggtcatatttctcttta
tcgagaaatcgaagaagctatccaagggttttgccgagcctactcgtatg
gtacctaa
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protein sequence of RPOC1

>JX118016.1-RPOC1.p2 ID=JX118016.1-RPOC1.p2; Name=RPOC1; organism=Fragaria viridis; type=polypeptide; length=201bp
PLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPIS
VPTQDMLIGLYVLTSGNRRGICANRYNPCNRTNSKNERIADNNYKYTNEP
FFCNSYDAIGAYRQKRIHLDSPLWLRWQLDQRVITSRETPIEVHYESLGT
SHEIYGHYVIVRSIKKEVLCIYVRTTVGHISLYREIEEAIQGFCRAYSYG
T
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mRNA from alignment at JX118016:1458..2065-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JX118016.1-RPOC1.m2 ID=JX118016.1-RPOC1.m2; Name=RPOC1; organism=Fragaria viridis; type=mRNA; length=608bp; location=Sequence derived from: JX118016:1458..2065- (Fragaria viridis
ATCCATTAGTTTGTAAGGGATTTAACGCAGACTTTGATGGGGATCAAATG
GCTGTTCATGTACCTTTATCTTTGGAGGCTCAGGCGGAGGCCCGTTTACT
TATGTTTTCTCATATGAATCTCTTGTCTCCAGCTATTGGGGATCCTATTT
CCGTACCAACCCAAGATATGCTTATCGGGCTCTATGTATTAACGAGCGGG
AATCGCCGAGGTATTTGTGCAAATAGGTATAATCCATGTAATCGCACAAA
TTCTAAAAATGAAAGGATTGCCGATAATAATTATAAATATACGAACGAAC
CCTTTTTTTGTAATTCCTATGATGCAATTGGAGCTTATCGGCAGAAAAGA
ATCCATTTAGATAGTCCCTTGTGGCTCCGATGGCAGCTAGATCAACGTGT
TATTACTTCAAGAGAAACTCCCATCGAAGTTCACTATGAATCTTTGGGTA
CCTCTCATGAGATTTATGGGCACTATGTAATAGTAAGAAGTATAAAAAAA
GAAGTTCTTTGTATATATGTTCGAACCACAGTTGGTCATATTTCTCTTTA
TCGAGAAATCGAAGAAGCTATCCAAGGGTTTTGCCGAGCCTACTCGTATG
GTACCTAA
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Coding sequence (CDS) from alignment at JX118016:1458..2065-

>JX118016.1-RPOC1.m2 ID=JX118016.1-RPOC1.m2; Name=RPOC1; organism=Fragaria viridis; type=CDS; length=608bp; location=Sequence derived from: JX118016:1458..2065- (Fragaria viridis
ATCCATTAGTTTGTAAGGGATTTAACGCAGACTTTGATGGGGATCAAATG
GCTGTTCATGTACCTTTATCTTTGGAGGCTCAGGCGGAGGCCCGTTTACT
TATGTTTTCTCATATGAATCTCTTGTCTCCAGCTATTGGGGATCCTATTT
CCGTACCAACCCAAGATATGCTTATCGGGCTCTATGTATTAACGAGCGGG
AATCGCCGAGGTATTTGTGCAAATAGGTATAATCCATGTAATCGCACAAA
TTCTAAAAATGAAAGGATTGCCGATAATAATTATAAATATACGAACGAAC
CCTTTTTTTGTAATTCCTATGATGCAATTGGAGCTTATCGGCAGAAAAGA
ATCCATTTAGATAGTCCCTTGTGGCTCCGATGGCAGCTAGATCAACGTGT
TATTACTTCAAGAGAAACTCCCATCGAAGTTCACTATGAATCTTTGGGTA
CCTCTCATGAGATTTATGGGCACTATGTAATAGTAAGAAGTATAAAAAAA
GAAGTTCTTTGTATATATGTTCGAACCACAGTTGGTCATATTTCTCTTTA
TCGAGAAATCGAAGAAGCTATCCAAGGGTTTTGCCGAGCCTACTCGTATG
GTACCTAA
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