RPOB, JX469076.1-RPOB.m1 (mRNA) Fragaria pentaphylla

Transcript Overview
NameRPOB
Unique NameJX469076.1-RPOB.m1
TypemRNA
OrganismFragaria pentaphylla ()
Sourcegenbank
ProductRNA polymerase beta subunit
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
JX469076regionJX469076:1..1159 -NCBI Rosaceae gene and mRNA sequencesn/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPOBJX469076.1-RPOBFragaria pentaphyllagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JX469076.1-RPOB.m1-cds1JX469076.1-RPOB.m1-cds1Fragaria pentaphyllaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
RPOBJX469076.1-RPOB.p1Fragaria pentaphyllapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI406365331
nuccoreJX469076.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>JX469076.1-RPOB.m1 ID=JX469076.1-RPOB.m1; Name=RPOB; organism=Fragaria pentaphylla; type=mRNA; length=1159bp
tcttgatatccctcagaacaacacatttttgttaccgcgagatatattgg
cagctgcggatcatttgattggaatgaaatttggaatgggtacacttgac
gatatgaatcatttgaaaaataaacgtattcggtctgtcgcagatctttt
acaagaccaatttggattgtccctggttcgtttagaaaatatggttagag
ggactatatgcggagcaattaagcataaattgatacccactcctcagaat
ttggtaacttcaactccattaacaaccacttatgaatctttttttggatt
acacccattatctcaagttttggatcgaactaatccattgacccaaatag
ttcatgggagaaaatcgagttatctgggccctggaggattgacagggcga
actgctagttttcggatacgagatattcaccccagtcactacggacgcat
ttgccctattgacacgtctgaaggaatcaatgttggacttattggatcct
tagcaattcatgcgaagattggttattgggggtctctagaaagtccgttt
tatgaaatttctgagagatcaaaaaaagtacggatgctctatttatcacc
aagtaaagatgaatactatatgatagcggcaggaaattctttgggcttga
atcgaggtattcaggaagaacaggttgttccagctcgataccgtcaagaa
ttcctgactgttgaatgggaacaggttcatcttcgaagtatttttccctt
ccaatatttttctattggagcttccctgattccttttattgagcataatg
atgcgaatcgagctttaatgagttctaatatgcaacgtcaagcagttccg
ctctctcggtctgaaaagtgcattgttggaactgggttggaacgccaagt
ggctttagattcgggggttactgctatagccgaacatgagggaaaaatca
tttataccgatactgacaagataattttatcgggcaatggggatactcta
aacattccattagttatataccaacgttccaacaaaaatacgtgtatgca
ccaaaaaccccaggttcagcgaggtaaatgtattaaaaagggacaagttt
tagcagacggtgctgctacggttggtggcgaactcgctttgggaaaaaat
gtattagta
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protein sequence of RPOB

>JX469076.1-RPOB.p1 ID=JX469076.1-RPOB.p1; Name=RPOB; organism=Fragaria pentaphylla; type=polypeptide; length=386bp
LDIPQNNTFLLPRDILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLL
QDQFGLSLVRLENMVRGTICGAIKHKLIPTPQNLVTSTPLTTTYESFFGL
HPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYGRI
CPIDTSEGINVGLIGSLAIHAKIGYWGSLESPFYEISERSKKVRMLYLSP
SKDEYYMIAAGNSLGLNRGIQEEQVVPARYRQEFLTVEWEQVHLRSIFPF
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQV
ALDSGVTAIAEHEGKIIYTDTDKIILSGNGDTLNIPLVIYQRSNKNTCMH
QKPQVQRGKCIKKGQVLADGAATVGGELALGKNVLV
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mRNA from alignment at JX469076:1..1159-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JX469076.1-RPOB.m1 ID=JX469076.1-RPOB.m1; Name=RPOB; organism=Fragaria pentaphylla; type=mRNA; length=1159bp; location=Sequence derived from: JX469076:1..1159- (Fragaria pentaphylla
TCTTGATATCCCTCAGAACAACACATTTTTGTTACCGCGAGATATATTGG
CAGCTGCGGATCATTTGATTGGAATGAAATTTGGAATGGGTACACTTGAC
GATATGAATCATTTGAAAAATAAACGTATTCGGTCTGTCGCAGATCTTTT
ACAAGACCAATTTGGATTGTCCCTGGTTCGTTTAGAAAATATGGTTAGAG
GGACTATATGCGGAGCAATTAAGCATAAATTGATACCCACTCCTCAGAAT
TTGGTAACTTCAACTCCATTAACAACCACTTATGAATCTTTTTTTGGATT
ACACCCATTATCTCAAGTTTTGGATCGAACTAATCCATTGACCCAAATAG
TTCATGGGAGAAAATCGAGTTATCTGGGCCCTGGAGGATTGACAGGGCGA
ACTGCTAGTTTTCGGATACGAGATATTCACCCCAGTCACTACGGACGCAT
TTGCCCTATTGACACGTCTGAAGGAATCAATGTTGGACTTATTGGATCCT
TAGCAATTCATGCGAAGATTGGTTATTGGGGGTCTCTAGAAAGTCCGTTT
TATGAAATTTCTGAGAGATCAAAAAAAGTACGGATGCTCTATTTATCACC
AAGTAAAGATGAATACTATATGATAGCGGCAGGAAATTCTTTGGGCTTGA
ATCGAGGTATTCAGGAAGAACAGGTTGTTCCAGCTCGATACCGTCAAGAA
TTCCTGACTGTTGAATGGGAACAGGTTCATCTTCGAAGTATTTTTCCCTT
CCAATATTTTTCTATTGGAGCTTCCCTGATTCCTTTTATTGAGCATAATG
ATGCGAATCGAGCTTTAATGAGTTCTAATATGCAACGTCAAGCAGTTCCG
CTCTCTCGGTCTGAAAAGTGCATTGTTGGAACTGGGTTGGAACGCCAAGT
GGCTTTAGATTCGGGGGTTACTGCTATAGCCGAACATGAGGGAAAAATCA
TTTATACCGATACTGACAAGATAATTTTATCGGGCAATGGGGATACTCTA
AACATTCCATTAGTTATATACCAACGTTCCAACAAAAATACGTGTATGCA
CCAAAAACCCCAGGTTCAGCGAGGTAAATGTATTAAAAAGGGACAAGTTT
TAGCAGACGGTGCTGCTACGGTTGGTGGCGAACTCGCTTTGGGAAAAAAT
GTATTAGTA
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Coding sequence (CDS) from alignment at JX469076:1..1159-

>JX469076.1-RPOB.m1 ID=JX469076.1-RPOB.m1; Name=RPOB; organism=Fragaria pentaphylla; type=CDS; length=1159bp; location=Sequence derived from: JX469076:1..1159- (Fragaria pentaphylla
TCTTGATATCCCTCAGAACAACACATTTTTGTTACCGCGAGATATATTGG
CAGCTGCGGATCATTTGATTGGAATGAAATTTGGAATGGGTACACTTGAC
GATATGAATCATTTGAAAAATAAACGTATTCGGTCTGTCGCAGATCTTTT
ACAAGACCAATTTGGATTGTCCCTGGTTCGTTTAGAAAATATGGTTAGAG
GGACTATATGCGGAGCAATTAAGCATAAATTGATACCCACTCCTCAGAAT
TTGGTAACTTCAACTCCATTAACAACCACTTATGAATCTTTTTTTGGATT
ACACCCATTATCTCAAGTTTTGGATCGAACTAATCCATTGACCCAAATAG
TTCATGGGAGAAAATCGAGTTATCTGGGCCCTGGAGGATTGACAGGGCGA
ACTGCTAGTTTTCGGATACGAGATATTCACCCCAGTCACTACGGACGCAT
TTGCCCTATTGACACGTCTGAAGGAATCAATGTTGGACTTATTGGATCCT
TAGCAATTCATGCGAAGATTGGTTATTGGGGGTCTCTAGAAAGTCCGTTT
TATGAAATTTCTGAGAGATCAAAAAAAGTACGGATGCTCTATTTATCACC
AAGTAAAGATGAATACTATATGATAGCGGCAGGAAATTCTTTGGGCTTGA
ATCGAGGTATTCAGGAAGAACAGGTTGTTCCAGCTCGATACCGTCAAGAA
TTCCTGACTGTTGAATGGGAACAGGTTCATCTTCGAAGTATTTTTCCCTT
CCAATATTTTTCTATTGGAGCTTCCCTGATTCCTTTTATTGAGCATAATG
ATGCGAATCGAGCTTTAATGAGTTCTAATATGCAACGTCAAGCAGTTCCG
CTCTCTCGGTCTGAAAAGTGCATTGTTGGAACTGGGTTGGAACGCCAAGT
GGCTTTAGATTCGGGGGTTACTGCTATAGCCGAACATGAGGGAAAAATCA
TTTATACCGATACTGACAAGATAATTTTATCGGGCAATGGGGATACTCTA
AACATTCCATTAGTTATATACCAACGTTCCAACAAAAATACGTGTATGCA
CCAAAAACCCCAGGTTCAGCGAGGTAAATGTATTAAAAAGGGACAAGTTT
TAGCAGACGGTGCTGCTACGGTTGGTGGCGAACTCGCTTTGGGAAAAAAT
GTATTAGTA
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