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Transcript Overview
| Name | NHX1 |
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| Unique Name | JX093583.1-NHX1.m1 |
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| Type | mRNA |
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| Organism | Malus zumi () |
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| Source | genbank |
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| Product | vacuolar Na+/H+ antiporter |
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Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| JX093583.1-NHX1.m1-cds1 | JX093583.1-NHX1.m1-cds1 | Malus zumi | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| NHX1 | JX093583.1-NHX1.p1 | Malus zumi | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| JX093583 |
region |
JX093583:1..1629+ |
NCBI Rosaceae gene and mRNA sequences |
Sequences
The
following sequences are available for this feature:
mRNA sequence >JX093583.1-NHX1.m1 ID=JX093583.1-NHX1.m1; Name=NHX1; organism=Malus zumi; type=mRNA; length=1629bp
atggcggttccacatttgagcatgttgatctcaaagttacaaaatctatc
cacttcggaccactcgtctgtggtttcgatgaaccttttcgtggcgctac
ttttagcttgtattgtgatcggacatcttctcgaggagaatcgatgggtg
aatgagtcgatcaccgcccttttgattggtatatgtactggagtagttat
tcttctgatcagtcgaggaaaaagttcgcatcttttggttttcagtgaag
atcttttctttatatgcctccttccgcctattatttttaatgccgggttt
caggtgaaaaagaagcagttctttgttaacttcagcaccattgtactgtt
tggtgccattggtacattagtatcctgcactatcatatcattaggcgcta
cacaattctttaagaaattggatatcggaactctggaattgggggacttt
cttgcgattggtgcaatttttgctgcaacggattctgtttgcatgttgca
ggtgctcaatcaagatgagacacctttactctacagtcttgtgttcgggg
agggtgttgttaacgatgcgacatctgtggttcttttcaatactattcag
agctttgatctcacccaccttgattccggcattgccttgcactttctggg
aaacttcttttatttgtttttcgcaagcaccatgctaggagtgtttgcag
ggctgcttagtgcttacattatcaaaaaactttattttggaaggcactct
acggatcgtgaggttgctcttatgatgctcatggcatatctgtcatatat
actggctgaattattctatttgagtggcattctcactgtgttcttttgtg
ggatcgtgatgtcgcattacacttggcacaatgtgactgagagttcaaga
gctacgaccaagcatgctttcgcaaccttgtcatttgttgccgaaatatt
tatcttcctttatgttggtatggatgccttggacattgaaaagtggagat
ttgtaagtgacagtcctggaacatcagtggcagtgagttcaatactgcta
ggtcttattatgcttggaagagcagctttcgttttccccttatcattctt
gtcgaacttaacaaagaaaaaccaacatgataaaattagcctccggcagc
aagttataatatggtgggctggtctcatgagaggtgctgtgtctatggca
cttgcttacaatcagtttacaaggtcaggccacacgcagttgcgagcaaa
tgcaatcatgatcactagcacgataactgttgttcttgtcagcacagtgg
ttttcggattgatgacgaaacctcttataaggttcttgctgcctcattca
ccaaaacaaacaaccagcatgttgtcgtcagaaccaacctctccaaaatc
agtcattgttccacttctagggcaggattctgtagatgatcttgttggcc
aagattttccacggccggccagcttacgcgatcttctgacaactccaacg
cacacagtccatcgctattggcgtaagtttgacaatgcattcatgcgtcc
agtgtttggaggccggggttttgttccctttgttcccgggtcaccaactg
aacgggacaacaatgttcagtggcaatga back to topprotein sequence of NHX1 >JX093583.1-NHX1.p1 ID=JX093583.1-NHX1.p1; Name=NHX1; organism=Malus zumi; type=polypeptide; length=542bp
MAVPHLSMLISKLQNLSTSDHSSVVSMNLFVALLLACIVIGHLLEENRWV
NESITALLIGICTGVVILLISRGKSSHLLVFSEDLFFICLLPPIIFNAGF
QVKKKQFFVNFSTIVLFGAIGTLVSCTIISLGATQFFKKLDIGTLELGDF
LAIGAIFAATDSVCMLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNTIQ
SFDLTHLDSGIALHFLGNFFYLFFASTMLGVFAGLLSAYIIKKLYFGRHS
TDREVALMMLMAYLSYILAELFYLSGILTVFFCGIVMSHYTWHNVTESSR
ATTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSDSPGTSVAVSSILL
GLIMLGRAAFVFPLSFLSNLTKKNQHDKISLRQQVIIWWAGLMRGAVSMA
LAYNQFTRSGHTQLRANAIMITSTITVVLVSTVVFGLMTKPLIRFLLPHS
PKQTTSMLSSEPTSPKSVIVPLLGQDSVDDLVGQDFPRPASLRDLLTTPT
HTVHRYWRKFDNAFMRPVFGGRGFVPFVPGSPTERDNNVQWQ back to topmRNA from alignment at JX093583:1..1629+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >JX093583.1-NHX1.m1 ID=JX093583.1-NHX1.m1; Name=NHX1; organism=Malus zumi; type=mRNA; length=1629bp; location=Sequence derived from: JX093583:1..1629+ (Malus zumi
atggcggttccacatttgagcatgttgatctcaaagttacaaaatctatc
cacttcggaccactcgtctgtggtttcgatgaaccttttcgtggcgctac
ttttagcttgtattgtgatcggacatcttctcgaggagaatcgatgggtg
aatgagtcgatcaccgcccttttgattggtatatgtactggagtagttat
tcttctgatcagtcgaggaaaaagttcgcatcttttggttttcagtgaag
atcttttctttatatgcctccttccgcctattatttttaatgccgggttt
caggtgaaaaagaagcagttctttgttaacttcagcaccattgtactgtt
tggtgccattggtacattagtatcctgcactatcatatcattaggcgcta
cacaattctttaagaaattggatatcggaactctggaattgggggacttt
cttgcgattggtgcaatttttgctgcaacggattctgtttgcatgttgca
ggtgctcaatcaagatgagacacctttactctacagtcttgtgttcgggg
agggtgttgttaacgatgcgacatctgtggttcttttcaatactattcag
agctttgatctcacccaccttgattccggcattgccttgcactttctggg
aaacttcttttatttgtttttcgcaagcaccatgctaggagtgtttgcag
ggctgcttagtgcttacattatcaaaaaactttattttggaaggcactct
acggatcgtgaggttgctcttatgatgctcatggcatatctgtcatatat
actggctgaattattctatttgagtggcattctcactgtgttcttttgtg
ggatcgtgatgtcgcattacacttggcacaatgtgactgagagttcaaga
gctacgaccaagcatgctttcgcaaccttgtcatttgttgccgaaatatt
tatcttcctttatgttggtatggatgccttggacattgaaaagtggagat
ttgtaagtgacagtcctggaacatcagtggcagtgagttcaatactgcta
ggtcttattatgcttggaagagcagctttcgttttccccttatcattctt
gtcgaacttaacaaagaaaaaccaacatgataaaattagcctccggcagc
aagttataatatggtgggctggtctcatgagaggtgctgtgtctatggca
cttgcttacaatcagtttacaaggtcaggccacacgcagttgcgagcaaa
tgcaatcatgatcactagcacgataactgttgttcttgtcagcacagtgg
ttttcggattgatgacgaaacctcttataaggttcttgctgcctcattca
ccaaaacaaacaaccagcatgttgtcgtcagaaccaacctctccaaaatc
agtcattgttccacttctagggcaggattctgtagatgatcttgttggcc
aagattttccacggccggccagcttacgcgatcttctgacaactccaacg
cacacagtccatcgctattggcgtaagtttgacaatgcattcatgcgtcc
agtgtttggaggccggggttttgttccctttgttcccgggtcaccaactg
aacgggacaacaatgttcagtggcaatga back to topCoding sequence (CDS) from alignment at JX093583:1..1629+ >JX093583.1-NHX1.m1 ID=JX093583.1-NHX1.m1; Name=NHX1; organism=Malus zumi; type=CDS; length=1629bp; location=Sequence derived from: JX093583:1..1629+ (Malus zumi
atggcggttccacatttgagcatgttgatctcaaagttacaaaatctatc
cacttcggaccactcgtctgtggtttcgatgaaccttttcgtggcgctac
ttttagcttgtattgtgatcggacatcttctcgaggagaatcgatgggtg
aatgagtcgatcaccgcccttttgattggtatatgtactggagtagttat
tcttctgatcagtcgaggaaaaagttcgcatcttttggttttcagtgaag
atcttttctttatatgcctccttccgcctattatttttaatgccgggttt
caggtgaaaaagaagcagttctttgttaacttcagcaccattgtactgtt
tggtgccattggtacattagtatcctgcactatcatatcattaggcgcta
cacaattctttaagaaattggatatcggaactctggaattgggggacttt
cttgcgattggtgcaatttttgctgcaacggattctgtttgcatgttgca
ggtgctcaatcaagatgagacacctttactctacagtcttgtgttcgggg
agggtgttgttaacgatgcgacatctgtggttcttttcaatactattcag
agctttgatctcacccaccttgattccggcattgccttgcactttctggg
aaacttcttttatttgtttttcgcaagcaccatgctaggagtgtttgcag
ggctgcttagtgcttacattatcaaaaaactttattttggaaggcactct
acggatcgtgaggttgctcttatgatgctcatggcatatctgtcatatat
actggctgaattattctatttgagtggcattctcactgtgttcttttgtg
ggatcgtgatgtcgcattacacttggcacaatgtgactgagagttcaaga
gctacgaccaagcatgctttcgcaaccttgtcatttgttgccgaaatatt
tatcttcctttatgttggtatggatgccttggacattgaaaagtggagat
ttgtaagtgacagtcctggaacatcagtggcagtgagttcaatactgcta
ggtcttattatgcttggaagagcagctttcgttttccccttatcattctt
gtcgaacttaacaaagaaaaaccaacatgataaaattagcctccggcagc
aagttataatatggtgggctggtctcatgagaggtgctgtgtctatggca
cttgcttacaatcagtttacaaggtcaggccacacgcagttgcgagcaaa
tgcaatcatgatcactagcacgataactgttgttcttgtcagcacagtgg
ttttcggattgatgacgaaacctcttataaggttcttgctgcctcattca
ccaaaacaaacaaccagcatgttgtcgtcagaaccaacctctccaaaatc
agtcattgttccacttctagggcaggattctgtagatgatcttgttggcc
aagattttccacggccggccagcttacgcgatcttctgacaactccaacg
cacacagtccatcgctattggcgtaagtttgacaatgcattcatgcgtcc
agtgtttggaggccggggttttgttccctttgttcccgggtcaccaactg
aacgggacaacaatgttcagtggcaatga back to top
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