DREB2-2, JQ669817.1-DREB2-2.m1 (mRNA) Malus x domestica

Transcript Overview


Name	DREB2-2
Unique Name	JQ669817.1-DREB2-2.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	dehydration-responsive element-binding protein (DREB2)

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
JQ669817	region	JQ669817:1..1719 +	NCBI Rosaceae gene and mRNA sequences	n/a
chr4	chromosome	DREB2-2:1..1719 . chr4:2716761..2719641 -		n/a
chr4	chromosome	DREB2-2:1..1719 . chr4:2916762..2919642 -		n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
JQ669817.1-DREB2-2.m1-cds1	JQ669817.1-DREB2-2.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
DREB2-2	JQ669817.1-DREB2-2.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	386646578
nuccore	JQ669817.1

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at JQ669817:1..1719+
coding sequence from alignment at JQ669817:1..1719+

mRNA sequence

>JQ669817.1-DREB2-2.m1 ID=JQ669817.1-DREB2-2.m1; Name=DREB2-2; organism=Malus x domestica; type=mRNA; length=1719bp
atgggagcttatgatcaaggtgttaacatgccgtctctgcccttggattc
ttcaaggaagaggaagacgcggagcagacgagatgggaactcggtcgctg
atacgctagagaagtggaaagagcataacaaacaactcgaatcggctaca
gaggaggggaaaaagcgtaaagtgccggccaaggggtccaagaaaggctg
tatgaaaggcaagggagggcctgagaatgcacgttgcaattacaggggag
tgcggcaaaggacttggggcaagtgggttgccgaaattcgggagccggac
aggggaagtaggctttggttaggtacttttcccactgccgttgatgctgc
ccttgcctatgacgaggctgcaaaggccatgtatggagatggagctcgcc
tcaacctcccgcacgcggtcaataatcatccatcgtcttcacaggagact
tcttcggttgcaacaccatcagggtcttctgcagcggcaactccaggatg
ctctacttccacttcaacctcgagtctgtctgaggtttgtgcagacgaga
attccaagcttttccttgatgtgaaaaaggaggatggtgagggcgaatca
aggatgtatccgttgtccggtgcggtccctcaagccagtggtatggtgaa
gcaagaagtcaatgaggactttgacatggattatcttcgcaataatcaac
aacaacctgtcggtatggtgaagccagaagtcaatgaggtctttgacatg
gattatcttcgcaataatcaacaacaacgcggagttgaggatcataatcc
gaatggcggagatggttttgttggggattattcagagaacttcacaatgg
gcgagttgtttgatatggatgagatgtttgatgtgaatgaactattgatg
cctccagatgatatttccctttgcaattcaggaccagagcaagtttcgag
acctgatgttggtcagccgggcatggagactctcagcagcgaagggccat
ctaatctgtcgtaccagctgcagtatccagacgccaagctgctcgggagt
ctgccgcacatggagcaggcccctttggacttcgaatacagttttgattt
catgaagcaagaggaggggagtaatcttaccagccaaaatgatcaagggt
acttcaatctaggaccgtccgacttgggtttggggggattcacagaagtt
gagcttgtaaacgcgacggagggctcgtttgacattgcatttcgcaatat
tcgaatgtttaaagatgtgggctggatcccccctcatcaactcggtttcc
atggtggtgtctccctcctccacagcttcggtgcttttcgctttggaggt
tcggcttggtttgggagcttggcgcattcgtctagttggggctcgacttg
gcttgagcgtcttggtgcaactcggctcgttgcggctttgctcggctcgg
ctttagcgtggacgctgaagttccattgtctagattttgcaggtgatcta
ggcctgagtgcctcggtccccctgcttttgagttgttcatcagatctttc
tcggtgtagtttagttcctgtcgcccttgtgcaccgcggtgatgctggtg
ttttggctaatttggtcttggcctttgtgtgttgttattgtgagtctcgt
cggctaacgatgactttgttatggtctcgcacttttgcgatgattttatg
tggtctcgttattcagtga

protein sequence of DREB2-2

>JQ669817.1-DREB2-2.p1 ID=JQ669817.1-DREB2-2.p1; Name=DREB2-2; organism=Malus x domestica; type=polypeptide; length=572bp
MGAYDQGVNMPSLPLDSSRKRKTRSRRDGNSVADTLEKWKEHNKQLESAT
EEGKKRKVPAKGSKKGCMKGKGGPENARCNYRGVRQRTWGKWVAEIREPD
RGSRLWLGTFPTAVDAALAYDEAAKAMYGDGARLNLPHAVNNHPSSSQET
SSVATPSGSSAAATPGCSTSTSTSSLSEVCADENSKLFLDVKKEDGEGES
RMYPLSGAVPQASGMVKQEVNEDFDMDYLRNNQQQPVGMVKPEVNEVFDM
DYLRNNQQQRGVEDHNPNGGDGFVGDYSENFTMGELFDMDEMFDVNELLM
PPDDISLCNSGPEQVSRPDVGQPGMETLSSEGPSNLSYQLQYPDAKLLGS
LPHMEQAPLDFEYSFDFMKQEEGSNLTSQNDQGYFNLGPSDLGLGGFTEV
ELVNATEGSFDIAFRNIRMFKDVGWIPPHQLGFHGGVSLLHSFGAFRFGG
SAWFGSLAHSSSWGSTWLERLGATRLVAALLGSALAWTLKFHCLDFAGDL
GLSASVPLLLSCSSDLSRCSLVPVALVHRGDAGVLANLVLAFVCCYCESR
RLTMTLLWSRTFAMILCGLVIQ

mRNA from alignment at JQ669817:1..1719+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>JQ669817.1-DREB2-2.m1 ID=JQ669817.1-DREB2-2.m1; Name=DREB2-2; organism=Malus x domestica; type=mRNA; length=1719bp; location=Sequence derived from: JQ669817:1..1719+ (Malus x domestica
atgggagcttatgatcaaggtgttaacatgccgtctctgcccttggattc
ttcaaggaagaggaagacgcggagcagacgagatgggaactcggtcgctg
atacgctagagaagtggaaagagcataacaaacaactcgaatcggctaca
gaggaggggaaaaagcgtaaagtgccggccaaggggtccaagaaaggctg
tatgaaaggcaagggagggcctgagaatgcacgttgcaattacaggggag
tgcggcaaaggacttggggcaagtgggttgccgaaattcgggagccggac
aggggaagtaggctttggttaggtacttttcccactgccgttgatgctgc
ccttgcctatgacgaggctgcaaaggccatgtatggagatggagctcgcc
tcaacctcccgcacgcggtcaataatcatccatcgtcttcacaggagact
tcttcggttgcaacaccatcagggtcttctgcagcggcaactccaggatg
ctctacttccacttcaacctcgagtctgtctgaggtttgtgcagacgaga
attccaagcttttccttgatgtgaaaaaggaggatggtgagggcgaatca
aggatgtatccgttgtccggtgcggtccctcaagccagtggtatggtgaa
gcaagaagtcaatgaggactttgacatggattatcttcgcaataatcaac
aacaacctgtcggtatggtgaagccagaagtcaatgaggtctttgacatg
gattatcttcgcaataatcaacaacaacgcggagttgaggatcataatcc
gaatggcggagatggttttgttggggattattcagagaacttcacaatgg
gcgagttgtttgatatggatgagatgtttgatgtgaatgaactattgatg
cctccagatgatatttccctttgcaattcaggaccagagcaagtttcgag
acctgatgttggtcagccgggcatggagactctcagcagcgaagggccat
ctaatctgtcgtaccagctgcagtatccagacgccaagctgctcgggagt
ctgccgcacatggagcaggcccctttggacttcgaatacagttttgattt
catgaagcaagaggaggggagtaatcttaccagccaaaatgatcaagggt
acttcaatctaggaccgtccgacttgggtttggggggattcacagaagtt
gagcttgtaaacgcgacggagggctcgtttgacattgcatttcgcaatat
tcgaatgtttaaagatgtgggctggatcccccctcatcaactcggtttcc
atggtggtgtctccctcctccacagcttcggtgcttttcgctttggaggt
tcggcttggtttgggagcttggcgcattcgtctagttggggctcgacttg
gcttgagcgtcttggtgcaactcggctcgttgcggctttgctcggctcgg
ctttagcgtggacgctgaagttccattgtctagattttgcaggtgatcta
ggcctgagtgcctcggtccccctgcttttgagttgttcatcagatctttc
tcggtgtagtttagttcctgtcgcccttgtgcaccgcggtgatgctggtg
ttttggctaatttggtcttggcctttgtgtgttgttattgtgagtctcgt
cggctaacgatgactttgttatggtctcgcacttttgcgatgattttatg
tggtctcgttattcagtga

Coding sequence (CDS) from alignment at JQ669817:1..1719+

>JQ669817.1-DREB2-2.m1 ID=JQ669817.1-DREB2-2.m1; Name=DREB2-2; organism=Malus x domestica; type=CDS; length=1719bp; location=Sequence derived from: JQ669817:1..1719+ (Malus x domestica
atgggagcttatgatcaaggtgttaacatgccgtctctgcccttggattc
ttcaaggaagaggaagacgcggagcagacgagatgggaactcggtcgctg
atacgctagagaagtggaaagagcataacaaacaactcgaatcggctaca
gaggaggggaaaaagcgtaaagtgccggccaaggggtccaagaaaggctg
tatgaaaggcaagggagggcctgagaatgcacgttgcaattacaggggag
tgcggcaaaggacttggggcaagtgggttgccgaaattcgggagccggac
aggggaagtaggctttggttaggtacttttcccactgccgttgatgctgc
ccttgcctatgacgaggctgcaaaggccatgtatggagatggagctcgcc
tcaacctcccgcacgcggtcaataatcatccatcgtcttcacaggagact
tcttcggttgcaacaccatcagggtcttctgcagcggcaactccaggatg
ctctacttccacttcaacctcgagtctgtctgaggtttgtgcagacgaga
attccaagcttttccttgatgtgaaaaaggaggatggtgagggcgaatca
aggatgtatccgttgtccggtgcggtccctcaagccagtggtatggtgaa
gcaagaagtcaatgaggactttgacatggattatcttcgcaataatcaac
aacaacctgtcggtatggtgaagccagaagtcaatgaggtctttgacatg
gattatcttcgcaataatcaacaacaacgcggagttgaggatcataatcc
gaatggcggagatggttttgttggggattattcagagaacttcacaatgg
gcgagttgtttgatatggatgagatgtttgatgtgaatgaactattgatg
cctccagatgatatttccctttgcaattcaggaccagagcaagtttcgag
acctgatgttggtcagccgggcatggagactctcagcagcgaagggccat
ctaatctgtcgtaccagctgcagtatccagacgccaagctgctcgggagt
ctgccgcacatggagcaggcccctttggacttcgaatacagttttgattt
catgaagcaagaggaggggagtaatcttaccagccaaaatgatcaagggt
acttcaatctaggaccgtccgacttgggtttggggggattcacagaagtt
gagcttgtaaacgcgacggagggctcgtttgacattgcatttcgcaatat
tcgaatgtttaaagatgtgggctggatcccccctcatcaactcggtttcc
atggtggtgtctccctcctccacagcttcggtgcttttcgctttggaggt
tcggcttggtttgggagcttggcgcattcgtctagttggggctcgacttg
gcttgagcgtcttggtgcaactcggctcgttgcggctttgctcggctcgg
ctttagcgtggacgctgaagttccattgtctagattttgcaggtgatcta
ggcctgagtgcctcggtccccctgcttttgagttgttcatcagatctttc
tcggtgtagtttagttcctgtcgcccttgtgcaccgcggtgatgctggtg
ttttggctaatttggtcttggcctttgtgtgttgttattgtgagtctcgt
cggctaacgatgactttgttatggtctcgcacttttgcgatgattttatg
tggtctcgttattcagtga