NCED3, JF825449.1-NCED3.m1 (mRNA) Pyrus pyrifolia

Transcript Overview


Name	NCED3
Unique Name	JF825449.1-NCED3.m1
Type	mRNA
Organism	Pyrus pyrifolia ()
Source	genbank
Product	9-cis-epoxycarotenoid dioxygenase

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
JF825449.1-NCED3.m1-cds1	JF825449.1-NCED3.m1-cds1	Pyrus pyrifolia	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NCED3	JF825449.1-NCED3.p1	Pyrus pyrifolia	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	341870473
nuccore	JF825449.1

Alignments

Feature Name	Type	Location	Analysis
JF825449	region	JF825449:100..894+	NCBI Rosaceae gene and mRNA sequences

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at JF825449:100..894+
coding sequence from alignment at JF825449:100..894+

mRNA sequence

>JF825449.1-NCED3.m1 ID=JF825449.1-NCED3.m1; Name=NCED3; organism=Pyrus pyrifolia; type=mRNA; length=795bp
atgatgcacgatttcgccatcaccgagaatttcgtggtgattcccgacca
gcaagtcgtgttcaagcttcaagaaatggtgaaaggcggatctccggtca
tctacgacaagaacaagaaatcccgattcggaattctcccgaaaaatgcg
acggattcgagggaattgatctgggtggaatccccggatacgttctgttt
ccatctgtggaatgcttgggaggagccggagacggaggaggtggtggtga
ttgggtcgtgtatgacgccgccggattcaatcttcaacgagtgtgaggag
aatttgaaaagcgtattatcggaaattcggctgaatttaaggacgggaaa
atcgacacggcgggcgattatcaaggaagagaaagaacaggtgaatctag
aagcgggaatggtgaacagaaaccgtctaggacggaaaacccggtttgcg
tatttggcgattgcagagccatggccgaaggtatcgggatttgcgaaggt
tgatctcgtaacaggggaagtaaaaaagcatatttacggcggtagaaaat
tcggtggggagccattttttttaccgaaagagggaaattcagggggggaa
gaagaagaagaagaagatgaagatgaagggtacattatggcgtttgttca
tgatgagaggacatggaaatcagaggtgcagatagtgaacgccatggatt
tgaaagtggaagctacaatcaaattgccttctcgagtgccatatggattt
catgggacatttgtccacgcaaacaatttggaaaatcaagcttaa

protein sequence of NCED3

>JF825449.1-NCED3.p1 ID=JF825449.1-NCED3.p1; Name=NCED3; organism=Pyrus pyrifolia; type=polypeptide; length=264bp
MMHDFAITENFVVIPDQQVVFKLQEMVKGGSPVIYDKNKKSRFGILPKNA
TDSRELIWVESPDTFCFHLWNAWEEPETEEVVVIGSCMTPPDSIFNECEE
NLKSVLSEIRLNLRTGKSTRRAIIKEEKEQVNLEAGMVNRNRLGRKTRFA
YLAIAEPWPKVSGFAKVDLVTGEVKKHIYGGRKFGGEPFFLPKEGNSGGE
EEEEEDEDEGYIMAFVHDERTWKSEVQIVNAMDLKVEATIKLPSRVPYGF
HGTFVHANNLENQA

mRNA from alignment at JF825449:100..894+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>JF825449.1-NCED3.m1 ID=JF825449.1-NCED3.m1; Name=NCED3; organism=Pyrus pyrifolia; type=mRNA; length=795bp; location=Sequence derived from: JF825449:100..894+ (Pyrus pyrifolia
atgatgcacgatttcgccatcaccgagaatttcgtggtgattcccgacca
gcaagtcgtgttcaagcttcaagaaatggtgaaaggcggatctccggtca
tctacgacaagaacaagaaatcccgattcggaattctcccgaaaaatgcg
acggattcgagggaattgatctgggtggaatccccggatacgttctgttt
ccatctgtggaatgcttgggaggagccggagacggaggaggtggtggtga
ttgggtcgtgtatgacgccgccggattcaatcttcaacgagtgtgaggag
aatttgaaaagcgtattatcggaaattcggctgaatttaaggacgggaaa
atcgacacggcgggcgattatcaaggaagagaaagaacaggtgaatctag
aagcgggaatggtgaacagaaaccgtctaggacggaaaacccggtttgcg
tatttggcgattgcagagccatggccgaaggtatcgggatttgcgaaggt
tgatctcgtaacaggggaagtaaaaaagcatatttacggcggtagaaaat
tcggtggggagccattttttttaccgaaagagggaaattcagggggggaa
gaagaagaagaagaagatgaagatgaagggtacattatggcgtttgttca
tgatgagaggacatggaaatcagaggtgcagatagtgaacgccatggatt
tgaaagtggaagctacaatcaaattgccttctcgagtgccatatggattt
catgggacatttgtccacgcaaacaatttggaaaatcaagcttaa

Coding sequence (CDS) from alignment at JF825449:100..894+

>JF825449.1-NCED3.m1 ID=JF825449.1-NCED3.m1; Name=NCED3; organism=Pyrus pyrifolia; type=CDS; length=795bp; location=Sequence derived from: JF825449:100..894+ (Pyrus pyrifolia
atgatgcacgatttcgccatcaccgagaatttcgtggtgattcccgacca
gcaagtcgtgttcaagcttcaagaaatggtgaaaggcggatctccggtca
tctacgacaagaacaagaaatcccgattcggaattctcccgaaaaatgcg
acggattcgagggaattgatctgggtggaatccccggatacgttctgttt
ccatctgtggaatgcttgggaggagccggagacggaggaggtggtggtga
ttgggtcgtgtatgacgccgccggattcaatcttcaacgagtgtgaggag
aatttgaaaagcgtattatcggaaattcggctgaatttaaggacgggaaa
atcgacacggcgggcgattatcaaggaagagaaagaacaggtgaatctag
aagcgggaatggtgaacagaaaccgtctaggacggaaaacccggtttgcg
tatttggcgattgcagagccatggccgaaggtatcgggatttgcgaaggt
tgatctcgtaacaggggaagtaaaaaagcatatttacggcggtagaaaat
tcggtggggagccattttttttaccgaaagagggaaattcagggggggaa
gaagaagaagaagaagatgaagatgaagggtacattatggcgtttgttca
tgatgagaggacatggaaatcagaggtgcagatagtgaacgccatggatt
tgaaagtggaagctacaatcaaattgccttctcgagtgccatatggattt
catgggacatttgtccacgcaaacaatttggaaaatcaagcttaa