MSD1A-b, JQ794794.1-MSD1A-b.m1 (mRNA) Prunus persica

Transcript Overview


Name	MSD1A-b
Unique Name	JQ794794.1-MSD1A-b.m1
Type	mRNA
Organism	Prunus persica (Peach)
Source	genbank
Product	chloroplast Mn-superoxide dismutase 1A-b
Genbank Note	MSD1A-b

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
JQ794794.1-MSD1A-b.m1-cds1	JQ794794.1-MSD1A-b.m1-cds1	Prunus persica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MSD1A-b	JQ794794.1-MSD1A-b.p1	Prunus persica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	383386093
nuccore	JQ794794.1

Alignments

Feature Name	Type	Location	Analysis
JQ794794	region	JQ794794:65..778+	NCBI Rosaceae gene and mRNA sequences
scaffold_2	supercontig	scaffold_2:23528174..23530666+	Prunus persica Whole Genome v1.0 Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at JQ794794:65..778+
coding sequence from alignment at JQ794794:65..778+

mRNA sequence

>JQ794794.1-MSD1A-b.m1 ID=JQ794794.1-MSD1A-b.m1; Name=MSD1A-b; organism=Prunus persica; type=mRNA; length=714bp
atggctcttcgatctctcgtggccaggaaatcccttggattggggtttca
gagcaaagccaagatcctcgccgtaggttctacagctcattcccgtggct
ttcaaaccttctcgcttcccgaccttccgtacgactatggcgctctcgag
cctgcaattagtggcgagatcatgcagctccatcaccagaagcaccacca
gacttacgtcaccaactacaacaaagctcttgagcagctccacgacgcca
tcgccaagggtgatgctgctgctgttgttaaattgcagagcgccatcaag
ttcaatggcggaggtcatgtcaaccactcgattttctggaagaatcttac
tcctgttggtcaaggaggtggtgagccccctcatggttccctgggctggg
ctattgacacaaattttggttctatggaagcattagtgcaaaagatcaat
gcagaaggcgctgctttgcagggttctggatgggtgtggctggctctaga
caaagagttgaagaaacttgtggttgaaaccactgcaaatcaggacccat
tggttaccaaaggaccaactttagttccattgcttggtattgatgtttgg
gagcatgcgtactacttacagtataagaatgtgaggccagattatctcaa
gaacatatggaaagtaatcaactggaagtatgccagcgaagtgtacgaga
aagaaagcccttga

protein sequence of MSD1A-b

>JQ794794.1-MSD1A-b.p1 ID=JQ794794.1-MSD1A-b.p1; Name=MSD1A-b; organism=Prunus persica; type=polypeptide; length=237bp
MALRSLVARKSLGLGFQSKAKILAVGSTAHSRGFQTFSLPDLPYDYGALE
PAISGEIMQLHHQKHHQTYVTNYNKALEQLHDAIAKGDAAAVVKLQSAIK
FNGGGHVNHSIFWKNLTPVGQGGGEPPHGSLGWAIDTNFGSMEALVQKIN
AEGAALQGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVW
EHAYYLQYKNVRPDYLKNIWKVINWKYASEVYEKESP

mRNA from alignment at JQ794794:65..778+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>JQ794794.1-MSD1A-b.m1 ID=JQ794794.1-MSD1A-b.m1; Name=MSD1A-b; organism=Prunus persica; type=mRNA; length=714bp; location=Sequence derived from: JQ794794:65..778+ (Prunus persica
atggctcttcgatctctcgtggccaggaaatcccttggattggggtttca
gagcaaagccaagatcctcgccgtaggttctacagctcattcccgtggct
ttcaaaccttctcgcttcccgaccttccgtacgactatggcgctctcgag
cctgcaattagtggcgagatcatgcagctccatcaccagaagcaccacca
gacttacgtcaccaactacaacaaagctcttgagcagctccacgacgcca
tcgccaagggtgatgctgctgctgttgttaaattgcagagcgccatcaag
ttcaatggcggaggtcatgtcaaccactcgattttctggaagaatcttac
tcctgttggtcaaggaggtggtgagccccctcatggttccctgggctggg
ctattgacacaaattttggttctatggaagcattagtgcaaaagatcaat
gcagaaggcgctgctttgcagggttctggatgggtgtggctggctctaga
caaagagttgaagaaacttgtggttgaaaccactgcaaatcaggacccat
tggttaccaaaggaccaactttagttccattgcttggtattgatgtttgg
gagcatgcgtactacttacagtataagaatgtgaggccagattatctcaa
gaacatatggaaagtaatcaactggaagtatgccagcgaagtgtacgaga
aagaaagcccttga

Coding sequence (CDS) from alignment at JQ794794:65..778+

>JQ794794.1-MSD1A-b.m1 ID=JQ794794.1-MSD1A-b.m1; Name=MSD1A-b; organism=Prunus persica; type=CDS; length=714bp; location=Sequence derived from: JQ794794:65..778+ (Prunus persica
atggctcttcgatctctcgtggccaggaaatcccttggattggggtttca
gagcaaagccaagatcctcgccgtaggttctacagctcattcccgtggct
ttcaaaccttctcgcttcccgaccttccgtacgactatggcgctctcgag
cctgcaattagtggcgagatcatgcagctccatcaccagaagcaccacca
gacttacgtcaccaactacaacaaagctcttgagcagctccacgacgcca
tcgccaagggtgatgctgctgctgttgttaaattgcagagcgccatcaag
ttcaatggcggaggtcatgtcaaccactcgattttctggaagaatcttac
tcctgttggtcaaggaggtggtgagccccctcatggttccctgggctggg
ctattgacacaaattttggttctatggaagcattagtgcaaaagatcaat
gcagaaggcgctgctttgcagggttctggatgggtgtggctggctctaga
caaagagttgaagaaacttgtggttgaaaccactgcaaatcaggacccat
tggttaccaaaggaccaactttagttccattgcttggtattgatgtttgg
gagcatgcgtactacttacagtataagaatgtgaggccagattatctcaa
gaacatatggaaagtaatcaactggaagtatgccagcgaagtgtacgaga
aagaaagcccttga