AP1, JN788262.1-AP1.m1 (mRNA) Fragaria x ananassa

Transcript Overview
NameAP1
Unique NameJN788262.1-AP1.m1
TypemRNA
OrganismFragaria x ananassa (Strawberry)
Sourcegenbank
ProductAP1-like transcription factor
Genbank NoteFaAP1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JN788262.1-AP1.m1-cds1JN788262.1-AP1.m1-cds1Fragaria x ananassaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
AP1JN788262.1-AP1.p1Fragaria x ananassapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI375173406
nuccoreJN788262.1
Alignments
Feature NameTypeLocationAnalysis
JN788262 region JN788262:1..738+ NCBI Rosaceae gene and mRNA sequences
LG4 chromosome LG4:26497226..26500156- Fragaria vesca Whole Genome v1.0 (build 8) Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>JN788262.1-AP1.m1 ID=JN788262.1-AP1.m1; Name=AP1; organism=Fragaria x ananassa; type=mRNA; length=738bp
atgggaaggggtagggttcagctgaagaggatagagaacaagatcaacag
gcaggtgacgttttcgaaacgaagaactgggttgctgaagaaggcgcatg
agatctctgtcatgtgcgatgctcaggttgctttgattgtcttctctaac
aaagggaagctctttgaatacgcaactgattcatgcatggaggatatact
tgaacgctatgagaggtactcatatgcagagagacagctagtggaacctg
attttgattcacagggtaactggcccttcgaacatgctaggctgaaggtg
aaagttgagcttctgcagagaaacctaaggcactatttgggagaagatct
ggattcattgagtatcaaagagatccaaagtttggagcaacagcttgaaa
ctgctcttaagcaaattcgatcaagaaaaaaccaactcatgcatgagtcg
atctctgagctacagaggaaggagaaggcaatcaaggagcagaacaactt
gctttcaaagaagattaaggagcacgagaagaatgtagcggaagctcagg
aggttcatgactgggagcagcagcagcaaaaccatggccttaacctgcta
gcacagggtccaattccatgtttgaacatggggggcactcagcaaaatga
tcagttccttcaggtgaggaggaaccagctcgaccttactctcgagccat
cgttgtattcatgccaccttggatgctttgcttcatga
back to top

protein sequence of AP1

>JN788262.1-AP1.p1 ID=JN788262.1-AP1.p1; Name=AP1; organism=Fragaria x ananassa; type=polypeptide; length=245bp
MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVMCDAQVALIVFSN
KGKLFEYATDSCMEDILERYERYSYAERQLVEPDFDSQGNWPFEHARLKV
KVELLQRNLRHYLGEDLDSLSIKEIQSLEQQLETALKQIRSRKNQLMHES
ISELQRKEKAIKEQNNLLSKKIKEHEKNVAEAQEVHDWEQQQQNHGLNLL
AQGPIPCLNMGGTQQNDQFLQVRRNQLDLTLEPSLYSCHLGCFAS
back to top

mRNA from alignment at JN788262:1..738+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JN788262.1-AP1.m1 ID=JN788262.1-AP1.m1; Name=AP1; organism=Fragaria x ananassa; type=mRNA; length=738bp; location=Sequence derived from: JN788262:1..738+ (Fragaria x ananassa
atgggaaggggtagggttcagctgaagaggatagagaacaagatcaacag
gcaggtgacgttttcgaaacgaagaactgggttgctgaagaaggcgcatg
agatctctgtcatgtgcgatgctcaggttgctttgattgtcttctctaac
aaagggaagctctttgaatacgcaactgattcatgcatggaggatatact
tgaacgctatgagaggtactcatatgcagagagacagctagtggaacctg
attttgattcacagggtaactggcccttcgaacatgctaggctgaaggtg
aaagttgagcttctgcagagaaacctaaggcactatttgggagaagatct
ggattcattgagtatcaaagagatccaaagtttggagcaacagcttgaaa
ctgctcttaagcaaattcgatcaagaaaaaaccaactcatgcatgagtcg
atctctgagctacagaggaaggagaaggcaatcaaggagcagaacaactt
gctttcaaagaagattaaggagcacgagaagaatgtagcggaagctcagg
aggttcatgactgggagcagcagcagcaaaaccatggccttaacctgcta
gcacagggtccaattccatgtttgaacatggggggcactcagcaaaatga
tcagttccttcaggtgaggaggaaccagctcgaccttactctcgagccat
cgttgtattcatgccaccttggatgctttgcttcatga
back to top

Coding sequence (CDS) from alignment at JN788262:1..738+

>JN788262.1-AP1.m1 ID=JN788262.1-AP1.m1; Name=AP1; organism=Fragaria x ananassa; type=CDS; length=738bp; location=Sequence derived from: JN788262:1..738+ (Fragaria x ananassa
atgggaaggggtagggttcagctgaagaggatagagaacaagatcaacag
gcaggtgacgttttcgaaacgaagaactgggttgctgaagaaggcgcatg
agatctctgtcatgtgcgatgctcaggttgctttgattgtcttctctaac
aaagggaagctctttgaatacgcaactgattcatgcatggaggatatact
tgaacgctatgagaggtactcatatgcagagagacagctagtggaacctg
attttgattcacagggtaactggcccttcgaacatgctaggctgaaggtg
aaagttgagcttctgcagagaaacctaaggcactatttgggagaagatct
ggattcattgagtatcaaagagatccaaagtttggagcaacagcttgaaa
ctgctcttaagcaaattcgatcaagaaaaaaccaactcatgcatgagtcg
atctctgagctacagaggaaggagaaggcaatcaaggagcagaacaactt
gctttcaaagaagattaaggagcacgagaagaatgtagcggaagctcagg
aggttcatgactgggagcagcagcagcaaaaccatggccttaacctgcta
gcacagggtccaattccatgtttgaacatggggggcactcagcaaaatga
tcagttccttcaggtgaggaggaaccagctcgaccttactctcgagccat
cgttgtattcatgccaccttggatgctttgcttcatga
back to top