|
|
Transcript Overview
| Name | BADH |
|---|
| Unique Name | JF968601.1-BADH.m1 |
|---|
| Type | mRNA |
|---|
| Organism | Pyrus betulifolia () |
|---|
| Source | genbank |
|---|
| Product | betaine-aldehyde dehydrogenase |
|---|
| Genbank Note | PbBADH |
|---|
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| JF968601.1-BADH.m1-cds1 | JF968601.1-BADH.m1-cds1 | Pyrus betulifolia | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BADH | JF968601.1-BADH.p1 | Pyrus betulifolia | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| JF968601 |
region |
JF968601:1..1512+ |
NCBI Rosaceae gene and mRNA sequences |
| scaffold00319 |
supercontig |
scaffold00319:90099..94690+ |
Pyrus communis Genome v1.0 Draft Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >JF968601.1-BADH.m1 ID=JF968601.1-BADH.m1; Name=BADH; organism=Pyrus betulifolia; type=mRNA; length=1512bp
atggcgatccaaataccgagccggctgttgttcatcgatggcgagtggag
agaaccggtcctcaagaaacgcatcccaatcatcaaccctgctactgaag
aaatcatcggggtaattcctgcagctacagctgaagatgtggagcttgca
gtggaggctgctcggagagctctttccaggaataaggggagagattgggc
ttcggcacctggggcagttcgtgccaagtatttgcgtgctattgctgcta
agataggagagagaaaacccgagatagccaaactcgaagcaattgattgt
ggaaaaccattggatgaagctgcatgggacatagatgatgtttccgggtg
ttttgagtactatgcagaacttgctgaaggtttggatgcacagcaaaagg
ctcctatttctcttcctatggagcaatttaagagtcatgttcttaaggag
cccattggcgttgttgggttaattacaccatggaactaccctttgttaat
ggctacatggaaagtcgctcctgccttagctgctgggtgtgctgcaatat
tgaagccctctgagttggcatctgtgacttgtttggagctagctgatgtg
tgtagagaggtcggtcttcctcctggtgtcctcaatatcctgactgggtt
gggccatgaagctggcgctcctttggcatctcatccccatgttgataaga
ttgcatttaccggaagtactatgaccgggagcaagattatgacagctgca
gccccattggtgaagcctgtttcactggagcttggtgggaaaagcccaat
tgttgtttttgatgatgttgatatcgacaaagctgctgaatggactgcct
tcggttgcttttggacaaatggacagatttgcagtgcaacatctcgtctt
atattgcatgaagacattgcaacagagtttttggataggcttgtgaaatg
gtgcaaaaacatcaagattgcagatcctcttgaagaaggttgcaggcttg
gccctgttgttagtggagggcaatatgagaaaatattgaagtccatcgaa
acagctaagagtgaaggcgcaagagttttgagtggtggggctcgtcctga
gcatctaaagaaaggattcttcattgaaccaacaatcataactgatgtaa
caacctccatgcaaatctggagagaagaagttttcggccctgttctttgt
gtcaaaacattcagttcagaagacgaagctcttgaactagcaaatgacac
ccattacggcttaggcgctgcagtcatatcaaaagatttagaaaggtgtg
accgtttctctaagggccttcaagcaggaattgtatggatcaactgctca
caaccatgcttctgtcaggctccatggggaggcaacaaacgaagtggttt
tgggcgtgaactagggaaatggggacttgataattacttgaccgtgaagc
aggttactgaatatgtatctgatgatccatggggttggtacgcgtcgcct
tcaaagctgtga back to topprotein sequence of BADH >JF968601.1-BADH.p1 ID=JF968601.1-BADH.p1; Name=BADH; organism=Pyrus betulifolia; type=polypeptide; length=503bp
MAIQIPSRLLFIDGEWREPVLKKRIPIINPATEEIIGVIPAATAEDVELA
VEAARRALSRNKGRDWASAPGAVRAKYLRAIAAKIGERKPEIAKLEAIDC
GKPLDEAAWDIDDVSGCFEYYAELAEGLDAQQKAPISLPMEQFKSHVLKE
PIGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELADV
CREVGLPPGVLNILTGLGHEAGAPLASHPHVDKIAFTGSTMTGSKIMTAA
APLVKPVSLELGGKSPIVVFDDVDIDKAAEWTAFGCFWTNGQICSATSRL
ILHEDIATEFLDRLVKWCKNIKIADPLEEGCRLGPVVSGGQYEKILKSIE
TAKSEGARVLSGGARPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLC
VKTFSSEDEALELANDTHYGLGAAVISKDLERCDRFSKGLQAGIVWINCS
QPCFCQAPWGGNKRSGFGRELGKWGLDNYLTVKQVTEYVSDDPWGWYASP
SKL back to topmRNA from alignment at JF968601:1..1512+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >JF968601.1-BADH.m1 ID=JF968601.1-BADH.m1; Name=BADH; organism=Pyrus betulifolia; type=mRNA; length=1512bp; location=Sequence derived from: JF968601:1..1512+ (Pyrus betulifolia
atggcgatccaaataccgagccggctgttgttcatcgatggcgagtggag
agaaccggtcctcaagaaacgcatcccaatcatcaaccctgctactgaag
aaatcatcggggtaattcctgcagctacagctgaagatgtggagcttgca
gtggaggctgctcggagagctctttccaggaataaggggagagattgggc
ttcggcacctggggcagttcgtgccaagtatttgcgtgctattgctgcta
agataggagagagaaaacccgagatagccaaactcgaagcaattgattgt
ggaaaaccattggatgaagctgcatgggacatagatgatgtttccgggtg
ttttgagtactatgcagaacttgctgaaggtttggatgcacagcaaaagg
ctcctatttctcttcctatggagcaatttaagagtcatgttcttaaggag
cccattggcgttgttgggttaattacaccatggaactaccctttgttaat
ggctacatggaaagtcgctcctgccttagctgctgggtgtgctgcaatat
tgaagccctctgagttggcatctgtgacttgtttggagctagctgatgtg
tgtagagaggtcggtcttcctcctggtgtcctcaatatcctgactgggtt
gggccatgaagctggcgctcctttggcatctcatccccatgttgataaga
ttgcatttaccggaagtactatgaccgggagcaagattatgacagctgca
gccccattggtgaagcctgtttcactggagcttggtgggaaaagcccaat
tgttgtttttgatgatgttgatatcgacaaagctgctgaatggactgcct
tcggttgcttttggacaaatggacagatttgcagtgcaacatctcgtctt
atattgcatgaagacattgcaacagagtttttggataggcttgtgaaatg
gtgcaaaaacatcaagattgcagatcctcttgaagaaggttgcaggcttg
gccctgttgttagtggagggcaatatgagaaaatattgaagtccatcgaa
acagctaagagtgaaggcgcaagagttttgagtggtggggctcgtcctga
gcatctaaagaaaggattcttcattgaaccaacaatcataactgatgtaa
caacctccatgcaaatctggagagaagaagttttcggccctgttctttgt
gtcaaaacattcagttcagaagacgaagctcttgaactagcaaatgacac
ccattacggcttaggcgctgcagtcatatcaaaagatttagaaaggtgtg
accgtttctctaagggccttcaagcaggaattgtatggatcaactgctca
caaccatgcttctgtcaggctccatggggaggcaacaaacgaagtggttt
tgggcgtgaactagggaaatggggacttgataattacttgaccgtgaagc
aggttactgaatatgtatctgatgatccatggggttggtacgcgtcgcct
tcaaagctgtga back to topCoding sequence (CDS) from alignment at JF968601:1..1512+ >JF968601.1-BADH.m1 ID=JF968601.1-BADH.m1; Name=BADH; organism=Pyrus betulifolia; type=CDS; length=1512bp; location=Sequence derived from: JF968601:1..1512+ (Pyrus betulifolia
atggcgatccaaataccgagccggctgttgttcatcgatggcgagtggag
agaaccggtcctcaagaaacgcatcccaatcatcaaccctgctactgaag
aaatcatcggggtaattcctgcagctacagctgaagatgtggagcttgca
gtggaggctgctcggagagctctttccaggaataaggggagagattgggc
ttcggcacctggggcagttcgtgccaagtatttgcgtgctattgctgcta
agataggagagagaaaacccgagatagccaaactcgaagcaattgattgt
ggaaaaccattggatgaagctgcatgggacatagatgatgtttccgggtg
ttttgagtactatgcagaacttgctgaaggtttggatgcacagcaaaagg
ctcctatttctcttcctatggagcaatttaagagtcatgttcttaaggag
cccattggcgttgttgggttaattacaccatggaactaccctttgttaat
ggctacatggaaagtcgctcctgccttagctgctgggtgtgctgcaatat
tgaagccctctgagttggcatctgtgacttgtttggagctagctgatgtg
tgtagagaggtcggtcttcctcctggtgtcctcaatatcctgactgggtt
gggccatgaagctggcgctcctttggcatctcatccccatgttgataaga
ttgcatttaccggaagtactatgaccgggagcaagattatgacagctgca
gccccattggtgaagcctgtttcactggagcttggtgggaaaagcccaat
tgttgtttttgatgatgttgatatcgacaaagctgctgaatggactgcct
tcggttgcttttggacaaatggacagatttgcagtgcaacatctcgtctt
atattgcatgaagacattgcaacagagtttttggataggcttgtgaaatg
gtgcaaaaacatcaagattgcagatcctcttgaagaaggttgcaggcttg
gccctgttgttagtggagggcaatatgagaaaatattgaagtccatcgaa
acagctaagagtgaaggcgcaagagttttgagtggtggggctcgtcctga
gcatctaaagaaaggattcttcattgaaccaacaatcataactgatgtaa
caacctccatgcaaatctggagagaagaagttttcggccctgttctttgt
gtcaaaacattcagttcagaagacgaagctcttgaactagcaaatgacac
ccattacggcttaggcgctgcagtcatatcaaaagatttagaaaggtgtg
accgtttctctaagggccttcaagcaggaattgtatggatcaactgctca
caaccatgcttctgtcaggctccatggggaggcaacaaacgaagtggttt
tgggcgtgaactagggaaatggggacttgataattacttgaccgtgaagc
aggttactgaatatgtatctgatgatccatggggttggtacgcgtcgcct
tcaaagctgtga back to top
|
