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Transcript Overview
| Name | LOX |
|---|
| Unique Name | FJ032015.1-LOX.m1 |
|---|
| Type | mRNA |
|---|
| Organism | Prunus persica (Peach) |
|---|
| Source | genbank |
|---|
| Product | lipoxygenase LOX-3 |
|---|
Alignments
The following features are aligned
| Feature Name | Type | Location | Analysis | Reference |
|---|
| FJ032015 | region | FJ032015:73..2874 + | NCBI Rosaceae gene and mRNA sequences | n/a |
| scaffold_6 | supercontig | LOX:1..2802 .
scaffold_6:26709840..26714015 - | | n/a |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| FJ032015.1-LOX.m1-cds1 | FJ032015.1-LOX.m1-cds1 | Prunus persica | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| LOX | FJ032015.1-LOX.p1 | Prunus persica | polypeptide |
Cross References
External references for this mRNA
Sequences
The
following sequences are available for this feature:
mRNA sequence >FJ032015.1-LOX.m1 ID=FJ032015.1-LOX.m1; Name=LOX; organism=Prunus persica; type=mRNA; length=2802bp
atgcttcattgcaagtatctcagtcctttgagcttcaggacaaaagctcc
ctgtggagctcggatgaactcagttgttgcagcagcaacaatcaacaatc
cagatcatgccacttcacccaatggcttgttgcctatgactatgaaattc
ttccctggtttcttgcgcatgactgatgttgcacgatctcaaccgttgac
tgtggcttcatctgccaagccgtcccagaacatcaccgttgatccacacc
ccaaagacggaggcaagaagatcaaagggagagtggtgttgatgaagaag
aatgttttggagttaaatgacctcaaagcatcgtttcttgatcgtgttca
tgagctgtggggcaaagtggtttctctgcagctcattagttctgttaatg
gtgaccctgaaaatgggcgtggaaaagttggaaagccagcatatttggaa
gattgggttaccacaatcattcccttaacagcaggggagtgtacatttga
ggttacttttgattgggatgaggagattggagtcccaggagcattcataa
taagaaatgatcatcacagtgagttttacttgaagactctcacacttgaa
gatgttcctggagaaggtcgaatccactttgtctgcaactcatgggtgta
tcctgctaaaaactacaaaaaagaccgtgttttcttcgctaacaagacat
atcttttaagtgatacaccagggccactaaagaaattcagagaagaagag
ctagtaaacttgagaggagatgatgatgatgaaacagaacttcaggaatg
ggacagggtttatggctatgcctactataatgatttggggaaaccgcata
agggtccaaaatatgcccgtccaattctcggtggctcgagtaagttccct
tatcctcggaggggaagaacaggaagacgaccaactaaggaagatcctga
aagtgagaccccgatgatgcttcttttgagcttattcatatatgttccga
gagatgaacggtttggtcacttaaagatgtcagacttgattgcttatgcc
ctgaaatccatatctcagctccttagacctgatgagctagcatctatact
tgttggcccccaaaaacattttgacagcttggaagatgttcttaaactct
atgaaggaggaatagagttgcctgagggtatactaaaatctgtaagggat
aacatccctgcagagacgatcaaggaacttttccgaacggatggtgaaaa
attcctgaaattcccagtgcctcaagtgatcaaagtggataagtcagcat
ggaaaactgatgaagaatttgcaagagaaatgctggctggaataaatcct
gtcgtcatacgtcgtctccaagaatttccacctgctagcaagctagacca
aaacatatatggggatcaaactagtcaaataaccaaagaacacataggac
ataacttagatggactcagcatagatgaggcaatcaagaacaagaagcta
ttcatattagaccaccatgatgcattgatgccgtacctgaggcgtataaa
cacaacttccaccaaaacttatgcaagcaggacactccttttcttagaga
atgatgggactttgaagccattagctattgagttaagcttgccacatcct
ggtggagatcaatttggctgcattagcaaagtctatactccgtctagcca
gggtgtcgagagttccatttggcaacttgctaaagcttatgtgaatgtaa
atgactctggctatcatcagctcatcagccactggttgagaactcatgcg
gtgatggaaccatttgtgatagccacaaataggcagttgagcgtgctgca
cccaattcataagcttctgcatcctcactttcgtgacactatgaatgtaa
atgcagtcgctcgacaggttctcattaatgctggaggaatactagaggca
acagtctttcctgcaaagttctcaatggaatggtcttctgtaatgtataa
gagctgggtttttcctgaacaagcgctccccatagatctgatcaaaagag
gaatggcagttgaagatccaaattcctcacatggtgtacgcttactgata
gaggactatccatatgctgctgatgggcttgagatctggtctgcaattaa
aacatgggttaaggactattgctccttctactataaaactgatgaaatgg
ttcaaaaggactcagaacttcagtcctggtggaaggaactcagagaggaa
ggtcatggtgacaaaaaagatgagccatggtggcctaaaatgcagacttg
tgaagagctgatagaatcatgcaccatcatcatatggattgcttcagccc
atcatgcagcaatcaattttgggcaatacccttttggtggatacccccca
aaccggccaagcataagcctgcagttcatgcccgaagaaggcactcctga
gtatgaggagctcaagacaaaccctgaaaaggcatttttgaaaacaatta
cacctcagctgcagacccttcttggcatggcctccatagaaatcttgtca
agacactcagctgatgagctttatttggggcagagagatgcgccagaatg
gacagcagacaatgacatattgcaagcctttaagaagtttagaaagaagc
tggaagaaattgaggaaaacatgaaaagaatgaacaaggatgagaaattg
aagaaccgggttggaccggccaagatgccatacactttgcttcatccttc
tagtgaggctggacttactggcaaggggattcccaacagtgtctcaattt
aa back to topprotein sequence of LOX >FJ032015.1-LOX.p1 ID=FJ032015.1-LOX.p1; Name=LOX; organism=Prunus persica; type=polypeptide; length=933bp
MLHCKYLSPLSFRTKAPCGARMNSVVAAATINNPDHATSPNGLLPMTMKF
FPGFLRMTDVARSQPLTVASSAKPSQNITVDPHPKDGGKKIKGRVVLMKK
NVLELNDLKASFLDRVHELWGKVVSLQLISSVNGDPENGRGKVGKPAYLE
DWVTTIIPLTAGECTFEVTFDWDEEIGVPGAFIIRNDHHSEFYLKTLTLE
DVPGEGRIHFVCNSWVYPAKNYKKDRVFFANKTYLLSDTPGPLKKFREEE
LVNLRGDDDDETELQEWDRVYGYAYYNDLGKPHKGPKYARPILGGSSKFP
YPRRGRTGRRPTKEDPESETPMMLLLSLFIYVPRDERFGHLKMSDLIAYA
LKSISQLLRPDELASILVGPQKHFDSLEDVLKLYEGGIELPEGILKSVRD
NIPAETIKELFRTDGEKFLKFPVPQVIKVDKSAWKTDEEFAREMLAGINP
VVIRRLQEFPPASKLDQNIYGDQTSQITKEHIGHNLDGLSIDEAIKNKKL
FILDHHDALMPYLRRINTTSTKTYASRTLLFLENDGTLKPLAIELSLPHP
GGDQFGCISKVYTPSSQGVESSIWQLAKAYVNVNDSGYHQLISHWLRTHA
VMEPFVIATNRQLSVLHPIHKLLHPHFRDTMNVNAVARQVLINAGGILEA
TVFPAKFSMEWSSVMYKSWVFPEQALPIDLIKRGMAVEDPNSSHGVRLLI
EDYPYAADGLEIWSAIKTWVKDYCSFYYKTDEMVQKDSELQSWWKELREE
GHGDKKDEPWWPKMQTCEELIESCTIIIWIASAHHAAINFGQYPFGGYPP
NRPSISLQFMPEEGTPEYEELKTNPEKAFLKTITPQLQTLLGMASIEILS
RHSADELYLGQRDAPEWTADNDILQAFKKFRKKLEEIEENMKRMNKDEKL
KNRVGPAKMPYTLLHPSSEAGLTGKGIPNSVSI back to topmRNA from alignment at FJ032015:73..2874+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >FJ032015.1-LOX.m1 ID=FJ032015.1-LOX.m1; Name=LOX; organism=Prunus persica; type=mRNA; length=2802bp; location=Sequence derived from: FJ032015:73..2874+ (Prunus persica
atgcttcattgcaagtatctcagtcctttgagcttcaggacaaaagctcc
ctgtggagctcggatgaactcagttgttgcagcagcaacaatcaacaatc
cagatcatgccacttcacccaatggcttgttgcctatgactatgaaattc
ttccctggtttcttgcgcatgactgatgttgcacgatctcaaccgttgac
tgtggcttcatctgccaagccgtcccagaacatcaccgttgatccacacc
ccaaagacggaggcaagaagatcaaagggagagtggtgttgatgaagaag
aatgttttggagttaaatgacctcaaagcatcgtttcttgatcgtgttca
tgagctgtggggcaaagtggtttctctgcagctcattagttctgttaatg
gtgaccctgaaaatgggcgtggaaaagttggaaagccagcatatttggaa
gattgggttaccacaatcattcccttaacagcaggggagtgtacatttga
ggttacttttgattgggatgaggagattggagtcccaggagcattcataa
taagaaatgatcatcacagtgagttttacttgaagactctcacacttgaa
gatgttcctggagaaggtcgaatccactttgtctgcaactcatgggtgta
tcctgctaaaaactacaaaaaagaccgtgttttcttcgctaacaagacat
atcttttaagtgatacaccagggccactaaagaaattcagagaagaagag
ctagtaaacttgagaggagatgatgatgatgaaacagaacttcaggaatg
ggacagggtttatggctatgcctactataatgatttggggaaaccgcata
agggtccaaaatatgcccgtccaattctcggtggctcgagtaagttccct
tatcctcggaggggaagaacaggaagacgaccaactaaggaagatcctga
aagtgagaccccgatgatgcttcttttgagcttattcatatatgttccga
gagatgaacggtttggtcacttaaagatgtcagacttgattgcttatgcc
ctgaaatccatatctcagctccttagacctgatgagctagcatctatact
tgttggcccccaaaaacattttgacagcttggaagatgttcttaaactct
atgaaggaggaatagagttgcctgagggtatactaaaatctgtaagggat
aacatccctgcagagacgatcaaggaacttttccgaacggatggtgaaaa
attcctgaaattcccagtgcctcaagtgatcaaagtggataagtcagcat
ggaaaactgatgaagaatttgcaagagaaatgctggctggaataaatcct
gtcgtcatacgtcgtctccaagaatttccacctgctagcaagctagacca
aaacatatatggggatcaaactagtcaaataaccaaagaacacataggac
ataacttagatggactcagcatagatgaggcaatcaagaacaagaagcta
ttcatattagaccaccatgatgcattgatgccgtacctgaggcgtataaa
cacaacttccaccaaaacttatgcaagcaggacactccttttcttagaga
atgatgggactttgaagccattagctattgagttaagcttgccacatcct
ggtggagatcaatttggctgcattagcaaagtctatactccgtctagcca
gggtgtcgagagttccatttggcaacttgctaaagcttatgtgaatgtaa
atgactctggctatcatcagctcatcagccactggttgagaactcatgcg
gtgatggaaccatttgtgatagccacaaataggcagttgagcgtgctgca
cccaattcataagcttctgcatcctcactttcgtgacactatgaatgtaa
atgcagtcgctcgacaggttctcattaatgctggaggaatactagaggca
acagtctttcctgcaaagttctcaatggaatggtcttctgtaatgtataa
gagctgggtttttcctgaacaagcgctccccatagatctgatcaaaagag
gaatggcagttgaagatccaaattcctcacatggtgtacgcttactgata
gaggactatccatatgctgctgatgggcttgagatctggtctgcaattaa
aacatgggttaaggactattgctccttctactataaaactgatgaaatgg
ttcaaaaggactcagaacttcagtcctggtggaaggaactcagagaggaa
ggtcatggtgacaaaaaagatgagccatggtggcctaaaatgcagacttg
tgaagagctgatagaatcatgcaccatcatcatatggattgcttcagccc
atcatgcagcaatcaattttgggcaatacccttttggtggatacccccca
aaccggccaagcataagcctgcagttcatgcccgaagaaggcactcctga
gtatgaggagctcaagacaaaccctgaaaaggcatttttgaaaacaatta
cacctcagctgcagacccttcttggcatggcctccatagaaatcttgtca
agacactcagctgatgagctttatttggggcagagagatgcgccagaatg
gacagcagacaatgacatattgcaagcctttaagaagtttagaaagaagc
tggaagaaattgaggaaaacatgaaaagaatgaacaaggatgagaaattg
aagaaccgggttggaccggccaagatgccatacactttgcttcatccttc
tagtgaggctggacttactggcaaggggattcccaacagtgtctcaattt
aa back to topCoding sequence (CDS) from alignment at FJ032015:73..2874+ >FJ032015.1-LOX.m1 ID=FJ032015.1-LOX.m1; Name=LOX; organism=Prunus persica; type=CDS; length=2802bp; location=Sequence derived from: FJ032015:73..2874+ (Prunus persica
atgcttcattgcaagtatctcagtcctttgagcttcaggacaaaagctcc
ctgtggagctcggatgaactcagttgttgcagcagcaacaatcaacaatc
cagatcatgccacttcacccaatggcttgttgcctatgactatgaaattc
ttccctggtttcttgcgcatgactgatgttgcacgatctcaaccgttgac
tgtggcttcatctgccaagccgtcccagaacatcaccgttgatccacacc
ccaaagacggaggcaagaagatcaaagggagagtggtgttgatgaagaag
aatgttttggagttaaatgacctcaaagcatcgtttcttgatcgtgttca
tgagctgtggggcaaagtggtttctctgcagctcattagttctgttaatg
gtgaccctgaaaatgggcgtggaaaagttggaaagccagcatatttggaa
gattgggttaccacaatcattcccttaacagcaggggagtgtacatttga
ggttacttttgattgggatgaggagattggagtcccaggagcattcataa
taagaaatgatcatcacagtgagttttacttgaagactctcacacttgaa
gatgttcctggagaaggtcgaatccactttgtctgcaactcatgggtgta
tcctgctaaaaactacaaaaaagaccgtgttttcttcgctaacaagacat
atcttttaagtgatacaccagggccactaaagaaattcagagaagaagag
ctagtaaacttgagaggagatgatgatgatgaaacagaacttcaggaatg
ggacagggtttatggctatgcctactataatgatttggggaaaccgcata
agggtccaaaatatgcccgtccaattctcggtggctcgagtaagttccct
tatcctcggaggggaagaacaggaagacgaccaactaaggaagatcctga
aagtgagaccccgatgatgcttcttttgagcttattcatatatgttccga
gagatgaacggtttggtcacttaaagatgtcagacttgattgcttatgcc
ctgaaatccatatctcagctccttagacctgatgagctagcatctatact
tgttggcccccaaaaacattttgacagcttggaagatgttcttaaactct
atgaaggaggaatagagttgcctgagggtatactaaaatctgtaagggat
aacatccctgcagagacgatcaaggaacttttccgaacggatggtgaaaa
attcctgaaattcccagtgcctcaagtgatcaaagtggataagtcagcat
ggaaaactgatgaagaatttgcaagagaaatgctggctggaataaatcct
gtcgtcatacgtcgtctccaagaatttccacctgctagcaagctagacca
aaacatatatggggatcaaactagtcaaataaccaaagaacacataggac
ataacttagatggactcagcatagatgaggcaatcaagaacaagaagcta
ttcatattagaccaccatgatgcattgatgccgtacctgaggcgtataaa
cacaacttccaccaaaacttatgcaagcaggacactccttttcttagaga
atgatgggactttgaagccattagctattgagttaagcttgccacatcct
ggtggagatcaatttggctgcattagcaaagtctatactccgtctagcca
gggtgtcgagagttccatttggcaacttgctaaagcttatgtgaatgtaa
atgactctggctatcatcagctcatcagccactggttgagaactcatgcg
gtgatggaaccatttgtgatagccacaaataggcagttgagcgtgctgca
cccaattcataagcttctgcatcctcactttcgtgacactatgaatgtaa
atgcagtcgctcgacaggttctcattaatgctggaggaatactagaggca
acagtctttcctgcaaagttctcaatggaatggtcttctgtaatgtataa
gagctgggtttttcctgaacaagcgctccccatagatctgatcaaaagag
gaatggcagttgaagatccaaattcctcacatggtgtacgcttactgata
gaggactatccatatgctgctgatgggcttgagatctggtctgcaattaa
aacatgggttaaggactattgctccttctactataaaactgatgaaatgg
ttcaaaaggactcagaacttcagtcctggtggaaggaactcagagaggaa
ggtcatggtgacaaaaaagatgagccatggtggcctaaaatgcagacttg
tgaagagctgatagaatcatgcaccatcatcatatggattgcttcagccc
atcatgcagcaatcaattttgggcaatacccttttggtggatacccccca
aaccggccaagcataagcctgcagttcatgcccgaagaaggcactcctga
gtatgaggagctcaagacaaaccctgaaaaggcatttttgaaaacaatta
cacctcagctgcagacccttcttggcatggcctccatagaaatcttgtca
agacactcagctgatgagctttatttggggcagagagatgcgccagaatg
gacagcagacaatgacatattgcaagcctttaagaagtttagaaagaagc
tggaagaaattgaggaaaacatgaaaagaatgaacaaggatgagaaattg
aagaaccgggttggaccggccaagatgccatacactttgcttcatccttc
tagtgaggctggacttactggcaaggggattcccaacagtgtctcaattt
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