TTG1, HM579852.1-TTG1.m1 (mRNA) Rubus idaeus

Transcript Overview


Name	TTG1
Unique Name	HM579852.1-TTG1.m1
Type	mRNA
Organism	Rubus idaeus ()
Source	genbank
Product	TTG1

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
HM579852	region	HM579852:4444..5478 +	NCBI Rosaceae gene and mRNA sequences	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
HM579852.1-TTG1.m1-cds1	HM579852.1-TTG1.m1-cds1	Rubus idaeus	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
TTG1	HM579852.1-TTG1.p1	Rubus idaeus	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	336442437
nuccore	HM579852.1

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HM579852:4444..5478+
coding sequence from alignment at HM579852:4444..5478+

mRNA sequence

>HM579852.1-TTG1.m1 ID=HM579852.1-TTG1.m1; Name=TTG1; organism=Rubus idaeus; type=mRNA; length=1035bp
atggacaactccacacaagaatcccatctcggaccggagaactcggtcac
gtacgagtcgccgtacccactctacgccatggccttctcttcgccccgaa
cccgacaccaccaccaccaccgaatcgccgtcggcagcttcatcgaggag
ttctctaaccgggtcgacattctctccttcgacccggacaccttaaccct
aaagcccaacccggccctctccttcgaccacccttatcctcccaccaagc
tcatgttccacccaaaccctaacaccctccacaagaccaacgacatcctc
gcctcctccggcgactacctccgcctctgggaggtcaaggactcctccgt
cgaccgcctcgagccaatttcggtcttgaacaacagcaagaccagcgaat
tctgcgctccactcacctcattcgactggaacgaaatcgagcccaggcga
attgggacctccagcatcgacaccacttgtacaatttgggatatcgaaaa
gggcgtcgtggagacccagctaattgcgcacgataaggaggtttacgaca
ttgcttggggcgaggctagggtttttgcttcggtttcggccgatgggtct
gtcaggattttcgatttgagggacaaggagcattctaccattatctacga
gagccctcagcctgatacccctctgcttcgattggcttggaataagcagg
acttgaggtacatggccacgattttgatggacagcaataaagttgtgatc
ttggatatccgttcgccgacgatgccggttgccgagttagagaggcacaa
gggtagtgtgaatgccattgcttgggcgccgcagagtgcgagacacattt
gttctgctggggatgattctcaggcgctgatttgggagctgcccaccgtt
gctgggccgaatgggattgatcccatgtcaatgtactcggccggtgcgga
gattaatcagctgcagtggtctgcagcgcagccggattggatcgccattg
catttactaacaagatgcagcttttgaaggtttga

protein sequence of TTG1

>HM579852.1-TTG1.p1 ID=HM579852.1-TTG1.p1; Name=TTG1; organism=Rubus idaeus; type=polypeptide; length=344bp
MDNSTQESHLGPENSVTYESPYPLYAMAFSSPRTRHHHHHRIAVGSFIEE
FSNRVDILSFDPDTLTLKPNPALSFDHPYPPTKLMFHPNPNTLHKTNDIL
ASSGDYLRLWEVKDSSVDRLEPISVLNNSKTSEFCAPLTSFDWNEIEPRR
IGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVFASVSADGS
VRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVI
LDIRSPTMPVAELERHKGSVNAIAWAPQSARHICSAGDDSQALIWELPTV
AGPNGIDPMSMYSAGAEINQLQWSAAQPDWIAIAFTNKMQLLKV

mRNA from alignment at HM579852:4444..5478+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>HM579852.1-TTG1.m1 ID=HM579852.1-TTG1.m1; Name=TTG1; organism=Rubus idaeus; type=mRNA; length=1035bp; location=Sequence derived from: HM579852:4444..5478+ (Rubus idaeus
atggacaactccacacaagaatcccatctcggaccggagaactcggtcac
gtacgagtcgccgtacccactctacgccatggccttctcttcgccccgaa
cccgacaccaccaccaccaccgaatcgccgtcggcagcttcatcgaggag
ttctctaaccgggtcgacattctctccttcgacccggacaccttaaccct
aaagcccaacccggccctctccttcgaccacccttatcctcccaccaagc
tcatgttccacccaaaccctaacaccctccacaagaccaacgacatcctc
gcctcctccggcgactacctccgcctctgggaggtcaaggactcctccgt
cgaccgcctcgagccaatttcggtcttgaacaacagcaagaccagcgaat
tctgcgctccactcacctcattcgactggaacgaaatcgagcccaggcga
attgggacctccagcatcgacaccacttgtacaatttgggatatcgaaaa
gggcgtcgtggagacccagctaattgcgcacgataaggaggtttacgaca
ttgcttggggcgaggctagggtttttgcttcggtttcggccgatgggtct
gtcaggattttcgatttgagggacaaggagcattctaccattatctacga
gagccctcagcctgatacccctctgcttcgattggcttggaataagcagg
acttgaggtacatggccacgattttgatggacagcaataaagttgtgatc
ttggatatccgttcgccgacgatgccggttgccgagttagagaggcacaa
gggtagtgtgaatgccattgcttgggcgccgcagagtgcgagacacattt
gttctgctggggatgattctcaggcgctgatttgggagctgcccaccgtt
gctgggccgaatgggattgatcccatgtcaatgtactcggccggtgcgga
gattaatcagctgcagtggtctgcagcgcagccggattggatcgccattg
catttactaacaagatgcagcttttgaaggtttga

Coding sequence (CDS) from alignment at HM579852:4444..5478+

>HM579852.1-TTG1.m1 ID=HM579852.1-TTG1.m1; Name=TTG1; organism=Rubus idaeus; type=CDS; length=1035bp; location=Sequence derived from: HM579852:4444..5478+ (Rubus idaeus
atggacaactccacacaagaatcccatctcggaccggagaactcggtcac
gtacgagtcgccgtacccactctacgccatggccttctcttcgccccgaa
cccgacaccaccaccaccaccgaatcgccgtcggcagcttcatcgaggag
ttctctaaccgggtcgacattctctccttcgacccggacaccttaaccct
aaagcccaacccggccctctccttcgaccacccttatcctcccaccaagc
tcatgttccacccaaaccctaacaccctccacaagaccaacgacatcctc
gcctcctccggcgactacctccgcctctgggaggtcaaggactcctccgt
cgaccgcctcgagccaatttcggtcttgaacaacagcaagaccagcgaat
tctgcgctccactcacctcattcgactggaacgaaatcgagcccaggcga
attgggacctccagcatcgacaccacttgtacaatttgggatatcgaaaa
gggcgtcgtggagacccagctaattgcgcacgataaggaggtttacgaca
ttgcttggggcgaggctagggtttttgcttcggtttcggccgatgggtct
gtcaggattttcgatttgagggacaaggagcattctaccattatctacga
gagccctcagcctgatacccctctgcttcgattggcttggaataagcagg
acttgaggtacatggccacgattttgatggacagcaataaagttgtgatc
ttggatatccgttcgccgacgatgccggttgccgagttagagaggcacaa
gggtagtgtgaatgccattgcttgggcgccgcagagtgcgagacacattt
gttctgctggggatgattctcaggcgctgatttgggagctgcccaccgtt
gctgggccgaatgggattgatcccatgtcaatgtactcggccggtgcgga
gattaatcagctgcagtggtctgcagcgcagccggattggatcgccattg
catttactaacaagatgcagcttttgaaggtttga