PPO, JF809859.1-PPO.m1 (mRNA) Pyrus x bretschneideri

Transcript Overview


Name	PPO
Unique Name	JF809859.1-PPO.m1
Type	mRNA
Organism	Pyrus x bretschneideri ()
Source	genbank
Product	polyphenol oxidase

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
JF809859.1-PPO.m1-cds1	JF809859.1-PPO.m1-cds1	Pyrus x bretschneideri	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
PPO	JF809859.1-PPO.p1	Pyrus x bretschneideri	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	334361506
nuccore	JF809859.1

Alignments

Feature Name	Type	Location	Analysis
JF809859	region	JF809859:1..1782+	NCBI Rosaceae gene and mRNA sequences
scaffold01624	supercontig	scaffold01624:18472..20253-	Pyrus communis Genome v1.0 Draft Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at JF809859:1..1782+
coding sequence from alignment at JF809859:1..1782+

mRNA sequence

>JF809859.1-PPO.m1 ID=JF809859.1-PPO.m1; Name=PPO; organism=Pyrus x bretschneideri; type=mRNA; length=1782bp
atggcgtctctctcacctccggtagtcaccacccccaccgttcccaaccc
cgccacaaaacctttctcccccttctctcaaaacaactcccaagtttccc
tactcacaaagcccaagcgttccttcgcacgtaaggtctcatgcaaagcc
acaaacaatgaccaaaatgatcaagcacagtccaaactagacaggagaaa
tgtgcttcttggtcttggaggtctatacggcgtggcgggtatgggcacag
acccgttcgcctttgccaagcctatagccccaccagacgtgtctaaatgt
ggttctgcagacttgccacagggtgcagaggccaccaactgctgcccgcc
gcccgccacaaaaatcattgactttaagctgcctgcccccgccaaactcc
gcatcaggccaccggctcacgccgttgacaaagcctacagggacaaattc
tacaaagcgatggagctcatgaaagccctacccgacgacgatccacgtag
cttcaagcaacaggcagccgtgcattgcgcttattgcgacggcgcgtacg
accaagccgggttcccagaactcgagctccaagtccacaactcatggctc
ttcttcccgttccaccggtactacttgtactttttcgagaagatgctagg
caaactcattaacgacccgacattcgctatgccgttctggaactgggact
cgccagccggcatgccactgcccgcgatttatgctgatccaaagtcccct
ctctacgacaagttccgatctgccaaacatcagccgccgactctgatcga
tctcgattacaacgggaccgaggacaatgtgtcaaaggaaaccacaatca
acgccaatctcaaaatcatgtacaggcaaatggtgtccaattccaagaat
gctcagttgttctttgggaacccgtacagggcaggggacgagcctgaccc
tggtggcggctccatcgaggggaccccacacgggccggttcatttatgga
ccggtgacaacacccagcccaactttgaggacatggggaacttttactcc
gctggtagggaccccgtattttatgcacaccattcgaatgtcgatcgaat
gtggagtatttggaaaactcttggaggtaagagaactgatcttgctgaca
aggactggttggactccggattcttgttttacaacgagaacgcagagtta
gtccgagtcaaggtcagggactgtttggagaccaaaaatcttgggtatgt
ataccaagatgtggacattccttggctcagctcgaagccaactccgcgaa
gggctaaagttgcattgggcaaaatagcgaagaagctgggagttgctcac
gcagctgttgcgtcgtccagcaaggtggtggcaggcactgagttcccgat
aagtctggggtcgaagataagcacggtggtgaagaggccgaagcagaaga
agaggagcaagaaaggccaaagggatgaggaggagatattggtgattgag
ggaatcgagtttgacagggacgtggctgtgaagtttgatgtgtttgtgaa
tgacgtcgatgacttgccgagtgggcctgacaagacggagtttgccggaa
gctttgtaagtgtgccgcacaggcacaagcacaagaagaagataaacact
attttgaggttagggttgacagatttgttggaggaaattgaggcggagga
cgatgacagcgtggtggtgactttggtgcccaagtacggcgctgtcaaca
ttggtggtatcaagattgagtttgcttcttag

protein sequence of PPO

>JF809859.1-PPO.p1 ID=JF809859.1-PPO.p1; Name=PPO; organism=Pyrus x bretschneideri; type=polypeptide; length=593bp
MASLSPPVVTTPTVPNPATKPFSPFSQNNSQVSLLTKPKRSFARKVSCKA
TNNDQNDQAQSKLDRRNVLLGLGGLYGVAGMGTDPFAFAKPIAPPDVSKC
GSADLPQGAEATNCCPPPATKIIDFKLPAPAKLRIRPPAHAVDKAYRDKF
YKAMELMKALPDDDPRSFKQQAAVHCAYCDGAYDQAGFPELELQVHNSWL
FFPFHRYYLYFFEKMLGKLINDPTFAMPFWNWDSPAGMPLPAIYADPKSP
LYDKFRSAKHQPPTLIDLDYNGTEDNVSKETTINANLKIMYRQMVSNSKN
AQLFFGNPYRAGDEPDPGGGSIEGTPHGPVHLWTGDNTQPNFEDMGNFYS
AGRDPVFYAHHSNVDRMWSIWKTLGGKRTDLADKDWLDSGFLFYNENAEL
VRVKVRDCLETKNLGYVYQDVDIPWLSSKPTPRRAKVALGKIAKKLGVAH
AAVASSSKVVAGTEFPISLGSKISTVVKRPKQKKRSKKGQRDEEEILVIE
GIEFDRDVAVKFDVFVNDVDDLPSGPDKTEFAGSFVSVPHRHKHKKKINT
ILRLGLTDLLEEIEAEDDDSVVVTLVPKYGAVNIGGIKIEFAS

mRNA from alignment at JF809859:1..1782+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>JF809859.1-PPO.m1 ID=JF809859.1-PPO.m1; Name=PPO; organism=Pyrus x bretschneideri; type=mRNA; length=1782bp; location=Sequence derived from: JF809859:1..1782+ (Pyrus x bretschneideri
atggcgtctctctcacctccggtagtcaccacccccaccgttcccaaccc
cgccacaaaacctttctcccccttctctcaaaacaactcccaagtttccc
tactcacaaagcccaagcgttccttcgcacgtaaggtctcatgcaaagcc
acaaacaatgaccaaaatgatcaagcacagtccaaactagacaggagaaa
tgtgcttcttggtcttggaggtctatacggcgtggcgggtatgggcacag
acccgttcgcctttgccaagcctatagccccaccagacgtgtctaaatgt
ggttctgcagacttgccacagggtgcagaggccaccaactgctgcccgcc
gcccgccacaaaaatcattgactttaagctgcctgcccccgccaaactcc
gcatcaggccaccggctcacgccgttgacaaagcctacagggacaaattc
tacaaagcgatggagctcatgaaagccctacccgacgacgatccacgtag
cttcaagcaacaggcagccgtgcattgcgcttattgcgacggcgcgtacg
accaagccgggttcccagaactcgagctccaagtccacaactcatggctc
ttcttcccgttccaccggtactacttgtactttttcgagaagatgctagg
caaactcattaacgacccgacattcgctatgccgttctggaactgggact
cgccagccggcatgccactgcccgcgatttatgctgatccaaagtcccct
ctctacgacaagttccgatctgccaaacatcagccgccgactctgatcga
tctcgattacaacgggaccgaggacaatgtgtcaaaggaaaccacaatca
acgccaatctcaaaatcatgtacaggcaaatggtgtccaattccaagaat
gctcagttgttctttgggaacccgtacagggcaggggacgagcctgaccc
tggtggcggctccatcgaggggaccccacacgggccggttcatttatgga
ccggtgacaacacccagcccaactttgaggacatggggaacttttactcc
gctggtagggaccccgtattttatgcacaccattcgaatgtcgatcgaat
gtggagtatttggaaaactcttggaggtaagagaactgatcttgctgaca
aggactggttggactccggattcttgttttacaacgagaacgcagagtta
gtccgagtcaaggtcagggactgtttggagaccaaaaatcttgggtatgt
ataccaagatgtggacattccttggctcagctcgaagccaactccgcgaa
gggctaaagttgcattgggcaaaatagcgaagaagctgggagttgctcac
gcagctgttgcgtcgtccagcaaggtggtggcaggcactgagttcccgat
aagtctggggtcgaagataagcacggtggtgaagaggccgaagcagaaga
agaggagcaagaaaggccaaagggatgaggaggagatattggtgattgag
ggaatcgagtttgacagggacgtggctgtgaagtttgatgtgtttgtgaa
tgacgtcgatgacttgccgagtgggcctgacaagacggagtttgccggaa
gctttgtaagtgtgccgcacaggcacaagcacaagaagaagataaacact
attttgaggttagggttgacagatttgttggaggaaattgaggcggagga
cgatgacagcgtggtggtgactttggtgcccaagtacggcgctgtcaaca
ttggtggtatcaagattgagtttgcttcttag

Coding sequence (CDS) from alignment at JF809859:1..1782+

>JF809859.1-PPO.m1 ID=JF809859.1-PPO.m1; Name=PPO; organism=Pyrus x bretschneideri; type=CDS; length=1782bp; location=Sequence derived from: JF809859:1..1782+ (Pyrus x bretschneideri
atggcgtctctctcacctccggtagtcaccacccccaccgttcccaaccc
cgccacaaaacctttctcccccttctctcaaaacaactcccaagtttccc
tactcacaaagcccaagcgttccttcgcacgtaaggtctcatgcaaagcc
acaaacaatgaccaaaatgatcaagcacagtccaaactagacaggagaaa
tgtgcttcttggtcttggaggtctatacggcgtggcgggtatgggcacag
acccgttcgcctttgccaagcctatagccccaccagacgtgtctaaatgt
ggttctgcagacttgccacagggtgcagaggccaccaactgctgcccgcc
gcccgccacaaaaatcattgactttaagctgcctgcccccgccaaactcc
gcatcaggccaccggctcacgccgttgacaaagcctacagggacaaattc
tacaaagcgatggagctcatgaaagccctacccgacgacgatccacgtag
cttcaagcaacaggcagccgtgcattgcgcttattgcgacggcgcgtacg
accaagccgggttcccagaactcgagctccaagtccacaactcatggctc
ttcttcccgttccaccggtactacttgtactttttcgagaagatgctagg
caaactcattaacgacccgacattcgctatgccgttctggaactgggact
cgccagccggcatgccactgcccgcgatttatgctgatccaaagtcccct
ctctacgacaagttccgatctgccaaacatcagccgccgactctgatcga
tctcgattacaacgggaccgaggacaatgtgtcaaaggaaaccacaatca
acgccaatctcaaaatcatgtacaggcaaatggtgtccaattccaagaat
gctcagttgttctttgggaacccgtacagggcaggggacgagcctgaccc
tggtggcggctccatcgaggggaccccacacgggccggttcatttatgga
ccggtgacaacacccagcccaactttgaggacatggggaacttttactcc
gctggtagggaccccgtattttatgcacaccattcgaatgtcgatcgaat
gtggagtatttggaaaactcttggaggtaagagaactgatcttgctgaca
aggactggttggactccggattcttgttttacaacgagaacgcagagtta
gtccgagtcaaggtcagggactgtttggagaccaaaaatcttgggtatgt
ataccaagatgtggacattccttggctcagctcgaagccaactccgcgaa
gggctaaagttgcattgggcaaaatagcgaagaagctgggagttgctcac
gcagctgttgcgtcgtccagcaaggtggtggcaggcactgagttcccgat
aagtctggggtcgaagataagcacggtggtgaagaggccgaagcagaaga
agaggagcaagaaaggccaaagggatgaggaggagatattggtgattgag
ggaatcgagtttgacagggacgtggctgtgaagtttgatgtgtttgtgaa
tgacgtcgatgacttgccgagtgggcctgacaagacggagtttgccggaa
gctttgtaagtgtgccgcacaggcacaagcacaagaagaagataaacact
attttgaggttagggttgacagatttgttggaggaaattgaggcggagga
cgatgacagcgtggtggtgactttggtgcccaagtacggcgctgtcaaca
ttggtggtatcaagattgagtttgcttcttag