MYB5, FR828538.1-MYB5.m1 (mRNA) Rosa rugosa

Transcript Overview
NameMYB5
Unique NameFR828538.1-MYB5.m1
TypemRNA
OrganismRosa rugosa ()
Sourcegenbank
Productputative MYB transcription factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
FR828538.1-MYB5.m1-cds1FR828538.1-MYB5.m1-cds1Rosa rugosaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MYB5FR828538.1-MYB5.p1Rosa rugosapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI327412611
nuccoreFR828538.1
Alignments
Feature NameTypeLocationAnalysis
FR828538 region FR828538:131..1114+ NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>FR828538.1-MYB5.m1 ID=FR828538.1-MYB5.m1; Name=MYB5; organism=Rosa rugosa; type=mRNA; length=984bp
atgggaaatccgaagcaaaaatggacgtcggaggaagaagaggcgctccg
agccggcgtcagaaagcacggcaccggaaagtggaaggatatccagaaag
accccgagttcaaccccttcctctcctctcgctccaatattgatctcaag
gacaaatggcggaatatgtctgttagtggcgtggggggtcccagagaaaa
agcaaggatgagaccaagagatagtcctgttactctattctccaccccac
agccttctgctgctgctcctgttaaacgtgacccagctgcagctcttctc
aaacgtgagtcatcagcagctcctgtcaaacgcgaggcagcagcatctct
tgtcaaaggcgagccagtggcagatgattccccaacagaagcaaaaactg
aagcaaaaacagctccaatgtacaatgcaatgatttttgaagcactttct
aactcaacagatccaaatggattggagactggtgctattgctaattttat
tgagcaaaggtatgttttggagaaaaagaatgaggtgccccaaaatttta
gaaggttattgagctcaaggttaagaaggctggttgcacaagaaaaactt
gaaaagtttcaaaattgcttcaagataaaaagtgactcgtcaggtgagac
aaaagcaccaccgcccccaaaacagaatgatgcaccactggccccaaacg
ccccaaaacagaatgacacaccagcggccccaaaacagaatgatgtccaa
cttacgcaattgcagagtcatgctgatgtaatcccctatgaaacagttga
ggaagcggcagtggctgctgcctacaagattgccgaagcagaaaacaaat
catttgtcgctgcagaagcagtgaaagagtcggagagggtttcacagatg
ttcgaagacacaaactcagtgctccagttggcagaagagtttcttaagaa
atgttcgcaaggtgaagttcttctggttgtgtaa
back to top

protein sequence of MYB5

>FR828538.1-MYB5.p1 ID=FR828538.1-MYB5.p1; Name=MYB5; organism=Rosa rugosa; type=polypeptide; length=327bp
MGNPKQKWTSEEEEALRAGVRKHGTGKWKDIQKDPEFNPFLSSRSNIDLK
DKWRNMSVSGVGGPREKARMRPRDSPVTLFSTPQPSAAAPVKRDPAAALL
KRESSAAPVKREAAASLVKGEPVADDSPTEAKTEAKTAPMYNAMIFEALS
NSTDPNGLETGAIANFIEQRYVLEKKNEVPQNFRRLLSSRLRRLVAQEKL
EKFQNCFKIKSDSSGETKAPPPPKQNDAPLAPNAPKQNDTPAAPKQNDVQ
LTQLQSHADVIPYETVEEAAVAAAYKIAEAENKSFVAAEAVKESERVSQM
FEDTNSVLQLAEEFLKKCSQGEVLLVV
back to top

mRNA from alignment at FR828538:131..1114+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>FR828538.1-MYB5.m1 ID=FR828538.1-MYB5.m1; Name=MYB5; organism=Rosa rugosa; type=mRNA; length=984bp; location=Sequence derived from: FR828538:131..1114+ (Rosa rugosa
atgggaaatccgaagcaaaaatggacgtcggaggaagaagaggcgctccg
agccggcgtcagaaagcacggcaccggaaagtggaaggatatccagaaag
accccgagttcaaccccttcctctcctctcgctccaatattgatctcaag
gacaaatggcggaatatgtctgttagtggcgtggggggtcccagagaaaa
agcaaggatgagaccaagagatagtcctgttactctattctccaccccac
agccttctgctgctgctcctgttaaacgtgacccagctgcagctcttctc
aaacgtgagtcatcagcagctcctgtcaaacgcgaggcagcagcatctct
tgtcaaaggcgagccagtggcagatgattccccaacagaagcaaaaactg
aagcaaaaacagctccaatgtacaatgcaatgatttttgaagcactttct
aactcaacagatccaaatggattggagactggtgctattgctaattttat
tgagcaaaggtatgttttggagaaaaagaatgaggtgccccaaaatttta
gaaggttattgagctcaaggttaagaaggctggttgcacaagaaaaactt
gaaaagtttcaaaattgcttcaagataaaaagtgactcgtcaggtgagac
aaaagcaccaccgcccccaaaacagaatgatgcaccactggccccaaacg
ccccaaaacagaatgacacaccagcggccccaaaacagaatgatgtccaa
cttacgcaattgcagagtcatgctgatgtaatcccctatgaaacagttga
ggaagcggcagtggctgctgcctacaagattgccgaagcagaaaacaaat
catttgtcgctgcagaagcagtgaaagagtcggagagggtttcacagatg
ttcgaagacacaaactcagtgctccagttggcagaagagtttcttaagaa
atgttcgcaaggtgaagttcttctggttgtgtaa
back to top

Coding sequence (CDS) from alignment at FR828538:131..1114+

>FR828538.1-MYB5.m1 ID=FR828538.1-MYB5.m1; Name=MYB5; organism=Rosa rugosa; type=CDS; length=984bp; location=Sequence derived from: FR828538:131..1114+ (Rosa rugosa
atgggaaatccgaagcaaaaatggacgtcggaggaagaagaggcgctccg
agccggcgtcagaaagcacggcaccggaaagtggaaggatatccagaaag
accccgagttcaaccccttcctctcctctcgctccaatattgatctcaag
gacaaatggcggaatatgtctgttagtggcgtggggggtcccagagaaaa
agcaaggatgagaccaagagatagtcctgttactctattctccaccccac
agccttctgctgctgctcctgttaaacgtgacccagctgcagctcttctc
aaacgtgagtcatcagcagctcctgtcaaacgcgaggcagcagcatctct
tgtcaaaggcgagccagtggcagatgattccccaacagaagcaaaaactg
aagcaaaaacagctccaatgtacaatgcaatgatttttgaagcactttct
aactcaacagatccaaatggattggagactggtgctattgctaattttat
tgagcaaaggtatgttttggagaaaaagaatgaggtgccccaaaatttta
gaaggttattgagctcaaggttaagaaggctggttgcacaagaaaaactt
gaaaagtttcaaaattgcttcaagataaaaagtgactcgtcaggtgagac
aaaagcaccaccgcccccaaaacagaatgatgcaccactggccccaaacg
ccccaaaacagaatgacacaccagcggccccaaaacagaatgatgtccaa
cttacgcaattgcagagtcatgctgatgtaatcccctatgaaacagttga
ggaagcggcagtggctgctgcctacaagattgccgaagcagaaaacaaat
catttgtcgctgcagaagcagtgaaagagtcggagagggtttcacagatg
ttcgaagacacaaactcagtgctccagttggcagaagagtttcttaagaa
atgttcgcaaggtgaagttcttctggttgtgtaa
back to top