CHS, HQ853494.1-CHS.m1 (mRNA) Malus toringoides

Transcript Overview
NameCHS
Unique NameHQ853494.1-CHS.m1
TypemRNA
OrganismMalus toringoides ()
Sourcegenbank
Productchalcone synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HQ853494.1-CHS.m1-cds1HQ853494.1-CHS.m1-cds1Malus toringoidesCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CHSHQ853494.1-CHS.p1Malus toringoidespolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI317457433
nuccoreHQ853494.1
Alignments
Feature NameTypeLocationAnalysis
HQ853494 region HQ853494:110..1279+ NCBI Rosaceae gene and mRNA sequences
Chr13 chromosome Chr13:43203553..43205943+ Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
unanchored chromosome unanchored:26837339..26839729+ Malus x domestica Whole Genome v1.0 Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>HQ853494.1-CHS.m1 ID=HQ853494.1-CHS.m1; Name=CHS; organism=Malus toringoides; type=mRNA; length=1170bp
atggtgactgtcgaggaagttcgcaaggctcaacgggctgagggtccggc
cacagtattcgccattgggacagcaactcctcccaattgtgtcgaccaag
ccacataccccgactattactttcgtatcaccaacagtgagcacaaggct
gagctcaaagaaaaattccagcgcatgtgtgacaaatctatgatcaagaa
gcgttacatgtacttgactgaggaaattctaaaggagaatccaagtgtgt
gcgagtacatggcaccatcacttgatgctcggcaggacatggtggttgtt
gaagtcccaaggcttggcaaagaggctgccaccaaggccatcaaggaatg
gggacagcccaagtccaaaatcacccacttggttttttgcaccaccagcg
gtgtcgacatgcccggcgctgactaccagctcaccaagctattgggcctc
cgcccctctgttaagcgcctcatgatgtaccaacaaggctgtttcgctgg
aggcacggttctccgtttggccaaggacttggccgaaaacaacaagggtg
cacgtgttcttgttgtgtgctctgagatcaccgcggtcaccttccgcggg
cctagtgacacccaccttgatagtcttgtgggtcaagccttgtttggcga
cggtgcagcggccgtcatcattggtgccgacccagtgcccgaagtcgaga
agcccttgtttgaattggtctcggcggcacaaaccattctccctgacagt
gatggggctatcgacggacatctccgtgaagtagggcttacgtttcacct
tttgaaggatgttcccgggcttatttcaaagaacatcgaaaagagcctta
acgaggccttcaagcctataggcatttcggactggaactcactcttctgg
attgcacacccaggtggccctgctattctggaccaagtagaggccaagtt
ggcgttgaagccagagaaactagaagcgacaaggcaagtgttgtcagatt
acggcaacatgtcgagtgcgtgtgtcttgtttattttggacgaggtgagg
aggaagtcagctgagaaaggactggagacaactggagaaggactggaatg
gggtgtgctgtttggatttgggcctggcctcacggtggagaccgtcgtgc
ttcacagcgtggctgcttga
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protein sequence of CHS

>HQ853494.1-CHS.p1 ID=HQ853494.1-CHS.p1; Name=CHS; organism=Malus toringoides; type=polypeptide; length=389bp
MVTVEEVRKAQRAEGPATVFAIGTATPPNCVDQATYPDYYFRITNSEHKA
ELKEKFQRMCDKSMIKKRYMYLTEEILKENPSVCEYMAPSLDARQDMVVV
EVPRLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGL
RPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRG
PSDTHLDSLVGQALFGDGAAAVIIGADPVPEVEKPLFELVSAAQTILPDS
DGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLNEAFKPIGISDWNSLFW
IAHPGGPAILDQVEAKLALKPEKLEATRQVLSDYGNMSSACVLFILDEVR
RKSAEKGLETTGEGLEWGVLFGFGPGLTVETVVLHSVAA
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mRNA from alignment at HQ853494:110..1279+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HQ853494.1-CHS.m1 ID=HQ853494.1-CHS.m1; Name=CHS; organism=Malus toringoides; type=mRNA; length=1170bp; location=Sequence derived from: HQ853494:110..1279+ (Malus toringoides
atggtgactgtcgaggaagttcgcaaggctcaacgggctgagggtccggc
cacagtattcgccattgggacagcaactcctcccaattgtgtcgaccaag
ccacataccccgactattactttcgtatcaccaacagtgagcacaaggct
gagctcaaagaaaaattccagcgcatgtgtgacaaatctatgatcaagaa
gcgttacatgtacttgactgaggaaattctaaaggagaatccaagtgtgt
gcgagtacatggcaccatcacttgatgctcggcaggacatggtggttgtt
gaagtcccaaggcttggcaaagaggctgccaccaaggccatcaaggaatg
gggacagcccaagtccaaaatcacccacttggttttttgcaccaccagcg
gtgtcgacatgcccggcgctgactaccagctcaccaagctattgggcctc
cgcccctctgttaagcgcctcatgatgtaccaacaaggctgtttcgctgg
aggcacggttctccgtttggccaaggacttggccgaaaacaacaagggtg
cacgtgttcttgttgtgtgctctgagatcaccgcggtcaccttccgcggg
cctagtgacacccaccttgatagtcttgtgggtcaagccttgtttggcga
cggtgcagcggccgtcatcattggtgccgacccagtgcccgaagtcgaga
agcccttgtttgaattggtctcggcggcacaaaccattctccctgacagt
gatggggctatcgacggacatctccgtgaagtagggcttacgtttcacct
tttgaaggatgttcccgggcttatttcaaagaacatcgaaaagagcctta
acgaggccttcaagcctataggcatttcggactggaactcactcttctgg
attgcacacccaggtggccctgctattctggaccaagtagaggccaagtt
ggcgttgaagccagagaaactagaagcgacaaggcaagtgttgtcagatt
acggcaacatgtcgagtgcgtgtgtcttgtttattttggacgaggtgagg
aggaagtcagctgagaaaggactggagacaactggagaaggactggaatg
gggtgtgctgtttggatttgggcctggcctcacggtggagaccgtcgtgc
ttcacagcgtggctgcttga
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Coding sequence (CDS) from alignment at HQ853494:110..1279+

>HQ853494.1-CHS.m1 ID=HQ853494.1-CHS.m1; Name=CHS; organism=Malus toringoides; type=CDS; length=1170bp; location=Sequence derived from: HQ853494:110..1279+ (Malus toringoides
atggtgactgtcgaggaagttcgcaaggctcaacgggctgagggtccggc
cacagtattcgccattgggacagcaactcctcccaattgtgtcgaccaag
ccacataccccgactattactttcgtatcaccaacagtgagcacaaggct
gagctcaaagaaaaattccagcgcatgtgtgacaaatctatgatcaagaa
gcgttacatgtacttgactgaggaaattctaaaggagaatccaagtgtgt
gcgagtacatggcaccatcacttgatgctcggcaggacatggtggttgtt
gaagtcccaaggcttggcaaagaggctgccaccaaggccatcaaggaatg
gggacagcccaagtccaaaatcacccacttggttttttgcaccaccagcg
gtgtcgacatgcccggcgctgactaccagctcaccaagctattgggcctc
cgcccctctgttaagcgcctcatgatgtaccaacaaggctgtttcgctgg
aggcacggttctccgtttggccaaggacttggccgaaaacaacaagggtg
cacgtgttcttgttgtgtgctctgagatcaccgcggtcaccttccgcggg
cctagtgacacccaccttgatagtcttgtgggtcaagccttgtttggcga
cggtgcagcggccgtcatcattggtgccgacccagtgcccgaagtcgaga
agcccttgtttgaattggtctcggcggcacaaaccattctccctgacagt
gatggggctatcgacggacatctccgtgaagtagggcttacgtttcacct
tttgaaggatgttcccgggcttatttcaaagaacatcgaaaagagcctta
acgaggccttcaagcctataggcatttcggactggaactcactcttctgg
attgcacacccaggtggccctgctattctggaccaagtagaggccaagtt
ggcgttgaagccagagaaactagaagcgacaaggcaagtgttgtcagatt
acggcaacatgtcgagtgcgtgtgtcttgtttattttggacgaggtgagg
aggaagtcagctgagaaaggactggagacaactggagaaggactggaatg
gggtgtgctgtttggatttgggcctggcctcacggtggagaccgtcgtgc
ttcacagcgtggctgcttga
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