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Transcript Overview
| Name | NCED1 |
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| Unique Name | GQ913652.1-NCED1.m1 |
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| Type | mRNA |
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| Organism | Prunus avium () |
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| Source | genbank |
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| Product | 9-cis-epoxycarotenoid dioxygenase |
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Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| GQ913652.1-NCED1.m1-cds1 | GQ913652.1-NCED1.m1-cds1 | Prunus avium | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| NCED1 | GQ913652.1-NCED1.p1 | Prunus avium | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| GQ913652 |
region |
GQ913652:1..1284+ |
NCBI Rosaceae gene and mRNA sequences |
| scaffold_4 |
supercontig |
scaffold_4:8570605..8571888+ |
Prunus persica Whole Genome v1.0 Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >GQ913652.1-NCED1.m1 ID=GQ913652.1-NCED1.m1; Name=NCED1; organism=Prunus avium; type=mRNA; length=1284bp
ttcgacggggacgggatggtgcacgccctgcaattcaaagaaggggccgc
cagctacgcctgcaggttcaccgaaacgcaccgttttaggcaggagtgcg
acctcgggcgtcccctgttcccaaaagccattggcgagctccacggccat
tccggtatcgcccgcctcctcctcttctacgcgcgcggcatgttcagcct
cgtggatcccacccacggcatcggcgtcgccaacgccggcctcgtctact
tcaacggtcgcctgctcgccatgtcggaagacgacttgccgtatcacatt
aaaatcaccgaaacaggggacctcaaaacggtcggtcgttacgacttcga
taaacagctcaagtccacaatgatagcccacccgaaagtggaccccacca
ctggcgagctcttcgcgctcagctacgacgtcgttcagaggccttacttg
aagtacttcaagttctcgccggacggcgagaaatcccccgacgtcgaaat
caatcttgaccagcccaccatgatgcacgacttcgctatcacagaacggt
atgtcgtaattccggaccagcaggtggtgttcaagctgcaggagatgatc
accggtgggtcccccgtgatctacgacaagaacaagatgtcacgttttgg
gattctcgacaagaatgcgaaggacgcttcggggatccgatgggtcgatt
gccccgattgcttctgcttccatctctggaacgcgtgggaggagccggag
acggacgaggtcgttgtgatcgggtcctgcatgaccccgcccgactccat
tttcaacgaatgcgacgagaaattggagagcgttctgtccgaaatccggc
tcaatttgaaaaccggcaagtcgacacggcgccgtatttgcgccgagaat
gtgaatttggaagccgggatggtaaaccggaacaaactggggagaaaaac
tcggttcgcgtacctggctctggccgagccgtggcccaaagtttcgggct
ttgccaaagtggacctctctactggtgaagtgaagaagcatatctatggc
gacgagaagtacggaggcgagcctctgtttctccccagagaccccaattc
ggaaaatgaggacgatgggtacattctggccttcgttcaagacgagaagg
agtggaaatcggagctgcaaatcgtgaacgccatggatttgaaagttgaa
gctacaattcaactaccctccagagttccgtatggttttcacggcacgtt
cataagctccaaggacttggtgaagcaggcctga back to topprotein sequence of NCED1 >GQ913652.1-NCED1.p1 ID=GQ913652.1-NCED1.p1; Name=NCED1; organism=Prunus avium; type=polypeptide; length=427bp
FDGDGMVHALQFKEGAASYACRFTETHRFRQECDLGRPLFPKAIGELHGH
SGIARLLLFYARGMFSLVDPTHGIGVANAGLVYFNGRLLAMSEDDLPYHI
KITETGDLKTVGRYDFDKQLKSTMIAHPKVDPTTGELFALSYDVVQRPYL
KYFKFSPDGEKSPDVEINLDQPTMMHDFAITERYVVIPDQQVVFKLQEMI
TGGSPVIYDKNKMSRFGILDKNAKDASGIRWVDCPDCFCFHLWNAWEEPE
TDEVVVIGSCMTPPDSIFNECDEKLESVLSEIRLNLKTGKSTRRRICAEN
VNLEAGMVNRNKLGRKTRFAYLALAEPWPKVSGFAKVDLSTGEVKKHIYG
DEKYGGEPLFLPRDPNSENEDDGYILAFVQDEKEWKSELQIVNAMDLKVE
ATIQLPSRVPYGFHGTFISSKDLVKQA back to topmRNA from alignment at GQ913652:1..1284+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >GQ913652.1-NCED1.m1 ID=GQ913652.1-NCED1.m1; Name=NCED1; organism=Prunus avium; type=mRNA; length=1284bp; location=Sequence derived from: GQ913652:1..1284+ (Prunus avium
ttcgacggggacgggatggtgcacgccctgcaattcaaagaaggggccgc
cagctacgcctgcaggttcaccgaaacgcaccgttttaggcaggagtgcg
acctcgggcgtcccctgttcccaaaagccattggcgagctccacggccat
tccggtatcgcccgcctcctcctcttctacgcgcgcggcatgttcagcct
cgtggatcccacccacggcatcggcgtcgccaacgccggcctcgtctact
tcaacggtcgcctgctcgccatgtcggaagacgacttgccgtatcacatt
aaaatcaccgaaacaggggacctcaaaacggtcggtcgttacgacttcga
taaacagctcaagtccacaatgatagcccacccgaaagtggaccccacca
ctggcgagctcttcgcgctcagctacgacgtcgttcagaggccttacttg
aagtacttcaagttctcgccggacggcgagaaatcccccgacgtcgaaat
caatcttgaccagcccaccatgatgcacgacttcgctatcacagaacggt
atgtcgtaattccggaccagcaggtggtgttcaagctgcaggagatgatc
accggtgggtcccccgtgatctacgacaagaacaagatgtcacgttttgg
gattctcgacaagaatgcgaaggacgcttcggggatccgatgggtcgatt
gccccgattgcttctgcttccatctctggaacgcgtgggaggagccggag
acggacgaggtcgttgtgatcgggtcctgcatgaccccgcccgactccat
tttcaacgaatgcgacgagaaattggagagcgttctgtccgaaatccggc
tcaatttgaaaaccggcaagtcgacacggcgccgtatttgcgccgagaat
gtgaatttggaagccgggatggtaaaccggaacaaactggggagaaaaac
tcggttcgcgtacctggctctggccgagccgtggcccaaagtttcgggct
ttgccaaagtggacctctctactggtgaagtgaagaagcatatctatggc
gacgagaagtacggaggcgagcctctgtttctccccagagaccccaattc
ggaaaatgaggacgatgggtacattctggccttcgttcaagacgagaagg
agtggaaatcggagctgcaaatcgtgaacgccatggatttgaaagttgaa
gctacaattcaactaccctccagagttccgtatggttttcacggcacgtt
cataagctccaaggacttggtgaagcaggcctga back to topCoding sequence (CDS) from alignment at GQ913652:1..1284+ >GQ913652.1-NCED1.m1 ID=GQ913652.1-NCED1.m1; Name=NCED1; organism=Prunus avium; type=CDS; length=1284bp; location=Sequence derived from: GQ913652:1..1284+ (Prunus avium
ttcgacggggacgggatggtgcacgccctgcaattcaaagaaggggccgc
cagctacgcctgcaggttcaccgaaacgcaccgttttaggcaggagtgcg
acctcgggcgtcccctgttcccaaaagccattggcgagctccacggccat
tccggtatcgcccgcctcctcctcttctacgcgcgcggcatgttcagcct
cgtggatcccacccacggcatcggcgtcgccaacgccggcctcgtctact
tcaacggtcgcctgctcgccatgtcggaagacgacttgccgtatcacatt
aaaatcaccgaaacaggggacctcaaaacggtcggtcgttacgacttcga
taaacagctcaagtccacaatgatagcccacccgaaagtggaccccacca
ctggcgagctcttcgcgctcagctacgacgtcgttcagaggccttacttg
aagtacttcaagttctcgccggacggcgagaaatcccccgacgtcgaaat
caatcttgaccagcccaccatgatgcacgacttcgctatcacagaacggt
atgtcgtaattccggaccagcaggtggtgttcaagctgcaggagatgatc
accggtgggtcccccgtgatctacgacaagaacaagatgtcacgttttgg
gattctcgacaagaatgcgaaggacgcttcggggatccgatgggtcgatt
gccccgattgcttctgcttccatctctggaacgcgtgggaggagccggag
acggacgaggtcgttgtgatcgggtcctgcatgaccccgcccgactccat
tttcaacgaatgcgacgagaaattggagagcgttctgtccgaaatccggc
tcaatttgaaaaccggcaagtcgacacggcgccgtatttgcgccgagaat
gtgaatttggaagccgggatggtaaaccggaacaaactggggagaaaaac
tcggttcgcgtacctggctctggccgagccgtggcccaaagtttcgggct
ttgccaaagtggacctctctactggtgaagtgaagaagcatatctatggc
gacgagaagtacggaggcgagcctctgtttctccccagagaccccaattc
ggaaaatgaggacgatgggtacattctggccttcgttcaagacgagaagg
agtggaaatcggagctgcaaatcgtgaacgccatggatttgaaagttgaa
gctacaattcaactaccctccagagttccgtatggttttcacggcacgtt
cataagctccaaggacttggtgaagcaggcctga back to top
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