MYB18, HM122619.1-MYB18.m1 (mRNA) Malus x domestica

Transcript Overview


Name	MYB18
Unique Name	HM122619.1-MYB18.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	MYB domain class transcription factor

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
HM122619.1-MYB18.m1-cds1	HM122619.1-MYB18.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MYB18	HM122619.1-MYB18.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	302398927
nuccore	HM122619.1

Alignments

Feature Name	Type	Location	Analysis
HM122619	region	HM122619:100..1203+	NCBI Rosaceae gene and mRNA sequences
Chr17	chromosome	Chr17:7052287..7053665+	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr00	chromosome	Chr00:12700979..12702359-	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr17	chromosome	chr17:6724550..6725926-	Malus x domestica Whole Genome v1.0 Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HM122619:100..1203+
coding sequence from alignment at HM122619:100..1203+

mRNA sequence

>HM122619.1-MYB18.m1 ID=HM122619.1-MYB18.m1; Name=MYB18; organism=Malus x domestica; type=mRNA; length=1104bp
atgggaagagctccttgctgtgataaaaatggactcaagaaaggtccatg
gacaactgaagaagatgccatgctagtgaattatattcagaagcatggac
ctggaaattggagaaaccttccaaagaatgcaggactccagagatgcggg
aagagttgccgcctcagatggactaactaccttagacctgatataaagag
aggaaggttctcctttgaagaagaagagactataatccaactacatagca
tccttggaaacaagtggtcagctattgctgctcgcttgccaggaaggaca
gacaatgaaataaaaaactactggaacacgcacatccgaaaaaggctcct
tcgaatgggaattgatcccgtgactcatgctccacgcatcgatcttcttg
atctgtcctcaattctcagctcatatgtgtgcaacaacccagctgctgca
ctactcaatttgtcaaacttgttgaatagtacccatcagcgacaaccact
tgttaatccagaaatgttaaggctagcaacaagtctgttatcaatcaaac
aagcaaacccggaaatgtgttcccaaaattataatctccatcaaaaccag
atttccaattctcaggaacaaaataatcaagttctcccacctttacaatc
caatgatcagtttcaaaatctcatccaagggggagacttttctgctgaca
tggcaaaacatctgatgcaacagatcaatgtggaaggtttctcaccaaac
atgaccaacttgagctgccccctttcccaagaaaacatagtccccccgaa
tttgagtgccgatcatcatcaaacagctgtctcccaagcaaactatgtgc
cttgcagtactacttctggtaaccctggtcctgattttccggaaaattca
tatttccaatcttttaactacaacaagaaccacgatttcagcttcgattc
agttatgtcaacgccttattcgagcccgactcctttgaattcatcaggta
catacataaacagcagcacagaggatgagaaggaaagctattgcagcagc
tggttaaagtttgaaatcccagagagtactttggacatcagtgatatcat
gtaa

protein sequence of MYB18

>HM122619.1-MYB18.p1 ID=HM122619.1-MYB18.p1; Name=MYB18; organism=Malus x domestica; type=polypeptide; length=367bp
MGRAPCCDKNGLKKGPWTTEEDAMLVNYIQKHGPGNWRNLPKNAGLQRCG
KSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRT
DNEIKNYWNTHIRKRLLRMGIDPVTHAPRIDLLDLSSILSSYVCNNPAAA
LLNLSNLLNSTHQRQPLVNPEMLRLATSLLSIKQANPEMCSQNYNLHQNQ
ISNSQEQNNQVLPPLQSNDQFQNLIQGGDFSADMAKHLMQQINVEGFSPN
MTNLSCPLSQENIVPPNLSADHHQTAVSQANYVPCSTTSGNPGPDFPENS
YFQSFNYNKNHDFSFDSVMSTPYSSPTPLNSSGTYINSSTEDEKESYCSS
WLKFEIPESTLDISDIM

mRNA from alignment at HM122619:100..1203+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>HM122619.1-MYB18.m1 ID=HM122619.1-MYB18.m1; Name=MYB18; organism=Malus x domestica; type=mRNA; length=1104bp; location=Sequence derived from: HM122619:100..1203+ (Malus x domestica
atgggaagagctccttgctgtgataaaaatggactcaagaaaggtccatg
gacaactgaagaagatgccatgctagtgaattatattcagaagcatggac
ctggaaattggagaaaccttccaaagaatgcaggactccagagatgcggg
aagagttgccgcctcagatggactaactaccttagacctgatataaagag
aggaaggttctcctttgaagaagaagagactataatccaactacatagca
tccttggaaacaagtggtcagctattgctgctcgcttgccaggaaggaca
gacaatgaaataaaaaactactggaacacgcacatccgaaaaaggctcct
tcgaatgggaattgatcccgtgactcatgctccacgcatcgatcttcttg
atctgtcctcaattctcagctcatatgtgtgcaacaacccagctgctgca
ctactcaatttgtcaaacttgttgaatagtacccatcagcgacaaccact
tgttaatccagaaatgttaaggctagcaacaagtctgttatcaatcaaac
aagcaaacccggaaatgtgttcccaaaattataatctccatcaaaaccag
atttccaattctcaggaacaaaataatcaagttctcccacctttacaatc
caatgatcagtttcaaaatctcatccaagggggagacttttctgctgaca
tggcaaaacatctgatgcaacagatcaatgtggaaggtttctcaccaaac
atgaccaacttgagctgccccctttcccaagaaaacatagtccccccgaa
tttgagtgccgatcatcatcaaacagctgtctcccaagcaaactatgtgc
cttgcagtactacttctggtaaccctggtcctgattttccggaaaattca
tatttccaatcttttaactacaacaagaaccacgatttcagcttcgattc
agttatgtcaacgccttattcgagcccgactcctttgaattcatcaggta
catacataaacagcagcacagaggatgagaaggaaagctattgcagcagc
tggttaaagtttgaaatcccagagagtactttggacatcagtgatatcat
gtaa

Coding sequence (CDS) from alignment at HM122619:100..1203+

>HM122619.1-MYB18.m1 ID=HM122619.1-MYB18.m1; Name=MYB18; organism=Malus x domestica; type=CDS; length=1104bp; location=Sequence derived from: HM122619:100..1203+ (Malus x domestica
atgggaagagctccttgctgtgataaaaatggactcaagaaaggtccatg
gacaactgaagaagatgccatgctagtgaattatattcagaagcatggac
ctggaaattggagaaaccttccaaagaatgcaggactccagagatgcggg
aagagttgccgcctcagatggactaactaccttagacctgatataaagag
aggaaggttctcctttgaagaagaagagactataatccaactacatagca
tccttggaaacaagtggtcagctattgctgctcgcttgccaggaaggaca
gacaatgaaataaaaaactactggaacacgcacatccgaaaaaggctcct
tcgaatgggaattgatcccgtgactcatgctccacgcatcgatcttcttg
atctgtcctcaattctcagctcatatgtgtgcaacaacccagctgctgca
ctactcaatttgtcaaacttgttgaatagtacccatcagcgacaaccact
tgttaatccagaaatgttaaggctagcaacaagtctgttatcaatcaaac
aagcaaacccggaaatgtgttcccaaaattataatctccatcaaaaccag
atttccaattctcaggaacaaaataatcaagttctcccacctttacaatc
caatgatcagtttcaaaatctcatccaagggggagacttttctgctgaca
tggcaaaacatctgatgcaacagatcaatgtggaaggtttctcaccaaac
atgaccaacttgagctgccccctttcccaagaaaacatagtccccccgaa
tttgagtgccgatcatcatcaaacagctgtctcccaagcaaactatgtgc
cttgcagtactacttctggtaaccctggtcctgattttccggaaaattca
tatttccaatcttttaactacaacaagaaccacgatttcagcttcgattc
agttatgtcaacgccttattcgagcccgactcctttgaattcatcaggta
catacataaacagcagcacagaggatgagaaggaaagctattgcagcagc
tggttaaagtttgaaatcccagagagtactttggacatcagtgatatcat
gtaa