GRF4, HM122564.1-GRF4.m1 (mRNA) Malus x domestica

Transcript Overview


Name	GRF4
Unique Name	HM122564.1-GRF4.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	GRF domain class transcription factor

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
HM122564	region	HM122564:93..1073 +	NCBI Rosaceae gene and mRNA sequences	n/a
Chr00	chromosome	Chr00:238725..244578 -	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation	n/a
unanchored	chromosome	GRF4:1..981 . unanchored:10846510..10852363 -		n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
HM122564.1-GRF4.m1-cds1	HM122564.1-GRF4.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
GRF4	HM122564.1-GRF4.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	302398817
nuccore	HM122564.1

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HM122564:93..1073+
coding sequence from alignment at HM122564:93..1073+

mRNA sequence

>HM122564.1-GRF4.m1 ID=HM122564.1-GRF4.m1; Name=GRF4; organism=Malus x domestica; type=mRNA; length=981bp
atgagcgggtcgtcggtgggcaatgaaggtcacgcgccgctcttcacagt
ggcgcaatgggctgagatggagaatcaagctttgatattcaagtatctca
aggcaggactccctgttccttctgaactcctcgcccctattcgcaccagt
ttcaatctcatttcccccaatttcttacgccaccaccccaccttggcttc
ctatagccggaagaagatggacccggagccagggcggtgccggaggacgg
atggcaagaaatggaggtgctccaaagatgcacatccggagtccaagtat
tgcgagcggcacatgaaccgaggccgttatcgttcaagaaagcttgtgga
atcacaaacttcctctcaatctttgtcgactgtgacgtcagacagtgtga
ttgggatctgcagccacagtgggagcttccagagcatgcccttacactca
atgggaaatagtggagctctatgctttggaagcaatgcatctgagttgaa
gatggagagtataccatatggggtatctaacaggggaaccaggggctgca
atggatcagaagaacataatttcgtgtcagaagctaggagtgcgaggtgt
cttcgggcagacagtaatgtagataatccgtggcttctaatggcgcctca
agttcccttgaaattagaaccgagaaatagttctctttggctaaacaaca
gctctcatctacagacattacaaaatatggagccattgagcgttaatgct
gaaatcaccaaacatgagtatgttggtgaagagtttggcttaccaggatc
tcaaaaacacgaacagcattctcttcaacctttctttgacgagtggccta
agtcaaaggatctggggttccatcaaaatgatcatagatcaaacataact
gaattgtcaatgtctaatgcaacggttcctgctaaatttttcctaaggag
cgctgaatcaccccgtgatgcctatacttga

protein sequence of GRF4

>HM122564.1-GRF4.p1 ID=HM122564.1-GRF4.p1; Name=GRF4; organism=Malus x domestica; type=polypeptide; length=326bp
MSGSSVGNEGHAPLFTVAQWAEMENQALIFKYLKAGLPVPSELLAPIRTS
FNLISPNFLRHHPTLASYSRKKMDPEPGRCRRTDGKKWRCSKDAHPESKY
CERHMNRGRYRSRKLVESQTSSQSLSTVTSDSVIGICSHSGSFQSMPLHS
MGNSGALCFGSNASELKMESIPYGVSNRGTRGCNGSEEHNFVSEARSARC
LRADSNVDNPWLLMAPQVPLKLEPRNSSLWLNNSSHLQTLQNMEPLSVNA
EITKHEYVGEEFGLPGSQKHEQHSLQPFFDEWPKSKDLGFHQNDHRSNIT
ELSMSNATVPAKFFLRSAESPRDAYT

mRNA from alignment at HM122564:93..1073+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>HM122564.1-GRF4.m1 ID=HM122564.1-GRF4.m1; Name=GRF4; organism=Malus x domestica; type=mRNA; length=981bp; location=Sequence derived from: HM122564:93..1073+ (Malus x domestica
atgagcgggtcgtcggtgggcaatgaaggtcacgcgccgctcttcacagt
ggcgcaatgggctgagatggagaatcaagctttgatattcaagtatctca
aggcaggactccctgttccttctgaactcctcgcccctattcgcaccagt
ttcaatctcatttcccccaatttcttacgccaccaccccaccttggcttc
ctatagccggaagaagatggacccggagccagggcggtgccggaggacgg
atggcaagaaatggaggtgctccaaagatgcacatccggagtccaagtat
tgcgagcggcacatgaaccgaggccgttatcgttcaagaaagcttgtgga
atcacaaacttcctctcaatctttgtcgactgtgacgtcagacagtgtga
ttgggatctgcagccacagtgggagcttccagagcatgcccttacactca
atgggaaatagtggagctctatgctttggaagcaatgcatctgagttgaa
gatggagagtataccatatggggtatctaacaggggaaccaggggctgca
atggatcagaagaacataatttcgtgtcagaagctaggagtgcgaggtgt
cttcgggcagacagtaatgtagataatccgtggcttctaatggcgcctca
agttcccttgaaattagaaccgagaaatagttctctttggctaaacaaca
gctctcatctacagacattacaaaatatggagccattgagcgttaatgct
gaaatcaccaaacatgagtatgttggtgaagagtttggcttaccaggatc
tcaaaaacacgaacagcattctcttcaacctttctttgacgagtggccta
agtcaaaggatctggggttccatcaaaatgatcatagatcaaacataact
gaattgtcaatgtctaatgcaacggttcctgctaaatttttcctaaggag
cgctgaatcaccccgtgatgcctatacttga

Coding sequence (CDS) from alignment at HM122564:93..1073+

>HM122564.1-GRF4.m1 ID=HM122564.1-GRF4.m1; Name=GRF4; organism=Malus x domestica; type=CDS; length=981bp; location=Sequence derived from: HM122564:93..1073+ (Malus x domestica
atgagcgggtcgtcggtgggcaatgaaggtcacgcgccgctcttcacagt
ggcgcaatgggctgagatggagaatcaagctttgatattcaagtatctca
aggcaggactccctgttccttctgaactcctcgcccctattcgcaccagt
ttcaatctcatttcccccaatttcttacgccaccaccccaccttggcttc
ctatagccggaagaagatggacccggagccagggcggtgccggaggacgg
atggcaagaaatggaggtgctccaaagatgcacatccggagtccaagtat
tgcgagcggcacatgaaccgaggccgttatcgttcaagaaagcttgtgga
atcacaaacttcctctcaatctttgtcgactgtgacgtcagacagtgtga
ttgggatctgcagccacagtgggagcttccagagcatgcccttacactca
atgggaaatagtggagctctatgctttggaagcaatgcatctgagttgaa
gatggagagtataccatatggggtatctaacaggggaaccaggggctgca
atggatcagaagaacataatttcgtgtcagaagctaggagtgcgaggtgt
cttcgggcagacagtaatgtagataatccgtggcttctaatggcgcctca
agttcccttgaaattagaaccgagaaatagttctctttggctaaacaaca
gctctcatctacagacattacaaaatatggagccattgagcgttaatgct
gaaatcaccaaacatgagtatgttggtgaagagtttggcttaccaggatc
tcaaaaacacgaacagcattctcttcaacctttctttgacgagtggccta
agtcaaaggatctggggttccatcaaaatgatcatagatcaaacataact
gaattgtcaatgtctaatgcaacggttcctgctaaatttttcctaaggag
cgctgaatcaccccgtgatgcctatacttga