ALF2, HM122429.1-ALF2.m1 (mRNA) Malus x domestica

Transcript Overview


Name	ALF2
Unique Name	HM122429.1-ALF2.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	ALF domain class transcription factor

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
HM122429.1-ALF2.m1-cds1	HM122429.1-ALF2.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ALF2	HM122429.1-ALF2.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	302398547
nuccore	HM122429.1

Alignments

Feature Name	Type	Location	Analysis
HM122429	region	HM122429:103..879+	NCBI Rosaceae gene and mRNA sequences
Chr15	chromosome	Chr15:3623191..3625848+	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr15	chromosome	chr15:392147..394803-	Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr15	chromosome	chr15:443013..445669+	Malus x domestica Whole Genome v1.0p Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HM122429:103..879+
coding sequence from alignment at HM122429:103..879+

mRNA sequence

>HM122429.1-ALF2.m1 ID=HM122429.1-ALF2.m1; Name=ALF2; organism=Malus x domestica; type=mRNA; length=777bp
atggacggcggtgctccgtacaacccgcgcacggtggaggaggtcttcag
agacttcaaagggcggagggccggcatgattaaagctctcaccaccgagg
tcgaagacttttttcagcagtgtgaccctgagaaggaaaatctttgcctt
tatggatttccaagcgagcagtgggaggttaatttgcctgcggaggaggt
tcccccagagcttccggagccagcgcttggtatcaactttgcgagagatg
ggatgcaagaaaaggactggttatccttggttgctgtccacagtgacgcg
tggttgcttgcagtggcattttattttggtgctaggtttggatttgataa
ggctgataggaaacgcctttttaatatgataaatgaacttccaacaatat
tcgaggttgtgacagggacagccaagaaacaagtgaaggagaagtcatca
aattcaaatcatggcagcaacagatctaagtcaaactctaagcgaggttc
tgagcctcaacccaggcattcaaaggcattgcaatcaaaggacgcggagg
aggacgaggaagaaggtgtggaagatgaagaagaggatgaggatgagcat
ggggagacactgtgtggggcctgtggagagaactacgcagctgatgagtt
ttggatttgctgcgatatctgcgagaagtggttccatggtaagtgtgtca
agatcacaccagcaagagccgagcatattaagcagtacaaatgcccatct
tgcagcaacaagagagccaaacattga

protein sequence of ALF2

>HM122429.1-ALF2.p1 ID=HM122429.1-ALF2.p1; Name=ALF2; organism=Malus x domestica; type=polypeptide; length=258bp
MDGGAPYNPRTVEEVFRDFKGRRAGMIKALTTEVEDFFQQCDPEKENLCL
YGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDA
WLLAVAFYFGARFGFDKADRKRLFNMINELPTIFEVVTGTAKKQVKEKSS
NSNHGSNRSKSNSKRGSEPQPRHSKALQSKDAEEDEEEGVEDEEEDEDEH
GETLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPS
CSNKRAKH

mRNA from alignment at HM122429:103..879+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>HM122429.1-ALF2.m1 ID=HM122429.1-ALF2.m1; Name=ALF2; organism=Malus x domestica; type=mRNA; length=777bp; location=Sequence derived from: HM122429:103..879+ (Malus x domestica
atggacggcggtgctccgtacaacccgcgcacggtggaggaggtcttcag
agacttcaaagggcggagggccggcatgattaaagctctcaccaccgagg
tcgaagacttttttcagcagtgtgaccctgagaaggaaaatctttgcctt
tatggatttccaagcgagcagtgggaggttaatttgcctgcggaggaggt
tcccccagagcttccggagccagcgcttggtatcaactttgcgagagatg
ggatgcaagaaaaggactggttatccttggttgctgtccacagtgacgcg
tggttgcttgcagtggcattttattttggtgctaggtttggatttgataa
ggctgataggaaacgcctttttaatatgataaatgaacttccaacaatat
tcgaggttgtgacagggacagccaagaaacaagtgaaggagaagtcatca
aattcaaatcatggcagcaacagatctaagtcaaactctaagcgaggttc
tgagcctcaacccaggcattcaaaggcattgcaatcaaaggacgcggagg
aggacgaggaagaaggtgtggaagatgaagaagaggatgaggatgagcat
ggggagacactgtgtggggcctgtggagagaactacgcagctgatgagtt
ttggatttgctgcgatatctgcgagaagtggttccatggtaagtgtgtca
agatcacaccagcaagagccgagcatattaagcagtacaaatgcccatct
tgcagcaacaagagagccaaacattga

Coding sequence (CDS) from alignment at HM122429:103..879+

>HM122429.1-ALF2.m1 ID=HM122429.1-ALF2.m1; Name=ALF2; organism=Malus x domestica; type=CDS; length=777bp; location=Sequence derived from: HM122429:103..879+ (Malus x domestica
atggacggcggtgctccgtacaacccgcgcacggtggaggaggtcttcag
agacttcaaagggcggagggccggcatgattaaagctctcaccaccgagg
tcgaagacttttttcagcagtgtgaccctgagaaggaaaatctttgcctt
tatggatttccaagcgagcagtgggaggttaatttgcctgcggaggaggt
tcccccagagcttccggagccagcgcttggtatcaactttgcgagagatg
ggatgcaagaaaaggactggttatccttggttgctgtccacagtgacgcg
tggttgcttgcagtggcattttattttggtgctaggtttggatttgataa
ggctgataggaaacgcctttttaatatgataaatgaacttccaacaatat
tcgaggttgtgacagggacagccaagaaacaagtgaaggagaagtcatca
aattcaaatcatggcagcaacagatctaagtcaaactctaagcgaggttc
tgagcctcaacccaggcattcaaaggcattgcaatcaaaggacgcggagg
aggacgaggaagaaggtgtggaagatgaagaagaggatgaggatgagcat
ggggagacactgtgtggggcctgtggagagaactacgcagctgatgagtt
ttggatttgctgcgatatctgcgagaagtggttccatggtaagtgtgtca
agatcacaccagcaagagccgagcatattaagcagtacaaatgcccatct
tgcagcaacaagagagccaaacattga