S34-RNase, AB540122.1-S34-RNase.m1 (mRNA) Malus x domestica

Transcript Overview
NameS34-RNase
Unique NameAB540122.1-S34-RNase.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
ProductS34-RNase
Genbank NoteSad5-RNase
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
AB540122regionAB540122:33..1537 +NCBI Rosaceae gene and mRNA sequencesn/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
S34-RNaseAB540122.1-S34-RNaseMalus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AB540122.1-S34-RNase.m1-cds1AB540122.1-S34-RNase.m1-cds1Malus x domesticaCDS
AB540122.1-S34-RNase.m1-cds2AB540122.1-S34-RNase.m1-cds2Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
S34-RNaseAB540122.1-S34-RNase.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI300116993
nuccoreAB540122.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>AB540122.1-S34-RNase.m1 ID=AB540122.1-S34-RNase.m1; Name=S34-RNase; organism=Malus x domestica; type=mRNA; length=699bp
atggggattacgaggatgatatatgtggttacgatggtattttcattaat
tgcattaatattgtcttcgtccncgatgggatacgattattttcaattta
cgcagcaatatcagccggcagtctgcaactctaatcctactccttgtaag
gatcctactgagaaattgtttacggttcacggtttgtggccttcaaactc
taatggacctgacccggtaaactgcaagccaaaaaccaaggtgcctcagg
cgcagcagccgatagatgcatcactcaaaccccagttggaaattatttgg
ccgaacgtactcaatcgagccgataatgaaagcttctggaataaacagtg
ggacaaacatggcacctgtgggtatcccacaataaaagacaagaaccatt
actttcaaacagtaatcaaaatgtacataacccagaaacaaaacgtttct
caaatcctatccaaagccaacatcaatccagacggtataggcaggacacg
gaagctaatcgaaagtgccatacgcaatggtaccaacgataaggaaccaa
aactcaagtgccaaaagaataatgggactattgaattagttgaggtcagt
ctttgcagcaattacctcggaaaacatttcataaattgccccaacaaaat
tccagaaggctcacgatatttctgccccatcaaagatatccggtattaa
back to top

protein sequence of S34-RNase

>AB540122.1-S34-RNase.p1 ID=AB540122.1-S34-RNase.p1; Name=S34-RNase; organism=Malus x domestica; type=polypeptide; length=232bp
MGITRMIYVVTMVFSLIALILSSSXMGYDYFQFTQQYQPAVCNSNPTPCK
DPTEKLFTVHGLWPSNSNGPDPVNCKPKTKVPQAQQPIDASLKPQLEIIW
PNVLNRADNESFWNKQWDKHGTCGYPTIKDKNHYFQTVIKMYITQKQNVS
QILSKANINPDGIGRTRKLIESAIRNGTNDKEPKLKCQKNNGTIELVEVS
LCSNYLGKHFINCPNKIPEGSRYFCPIKDIRY
back to top

mRNA from alignment at AB540122:33..1537+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AB540122.1-S34-RNase.m1 ID=AB540122.1-S34-RNase.m1; Name=S34-RNase; organism=Malus x domestica; type=mRNA; length=1505bp; location=Sequence derived from: AB540122:33..1537+ (Malus x domestica
atggggattacgaggatgatatatgtggttacgatggtattttcattaat
tgcattaatattgtcttcgtccncgatgggatacgattattttcaattta
cgcagcaatatcagccggcagtctgcaactctaatcctactccttgtaag
gatcctactgagaaattgtttacggttcacggtttgtggccttcaaactc
taatggacctgacccggtaaactgcaagccaaaaaccaaggtgcctcagg
cgcagcagccggtaatatatctgaaaattgaactttccccctctaaagac
attttttctagcctataacccatcatatcatatttatcgcaataagaccc
aataatcagaatccaactaaacaacttaccaaattagtttgtgtgtcatt
tttttgtattttttaaatctgtaatatgccctcatctaagccagtatgga
aagctcttgtaattacgttttaattgatggcatgcatccaatttggcaag
gtattgtagccacgaaatctagttctaaatgtaggaattaatttggaaat
atttttcatttcaacaataaatttcaatttgaatatacctaattttaggg
tttaatttcaacaatatatattgtttaattttataaaaataacatagcta
caatgaaacttacctacggtttatatttttttatgaaaaataatgtacct
atctttgaatttttacaaagttaatgtatctgcttttttaatttttaaca
aaactaatttaactacttccctttatagtattagtatacataatatgtag
aacatatgtccgtatatatttgatctaattcagttttggattgggggagt
tcacacaaaattaaaatatattaaacaaactaaatgtctgaaaaaattta
taagagatatggtggcctgattttataaataaacacaaattcatggacat
cttttttcaacatgacatcttattcaaattttgagtcttatttagaagtc
atcatacatgtgggcttttgtctagaagttatcataaatttttttattgt
atattttattttgtcagatagatgcatcactcaaaccccagttggaaatt
atttggccgaacgtactcaatcgagccgataatgaaagcttctggaataa
acagtgggacaaacatggcacctgtgggtatcccacaataaaagacaaga
accattactttcaaacagtaatcaaaatgtacataacccagaaacaaaac
gtttctcaaatcctatccaaagccaacatcaatccagacggtataggcag
gacacggaagctaatcgaaagtgccatacgcaatggtaccaacgataagg
aaccaaaactcaagtgccaaaagaataatgggactattgaattagttgag
gtcagtctttgcagcaattacctcggaaaacatttcataaattgccccaa
caaaattccagaaggctcacgatatttctgccccatcaaagatatccggt
attaa
back to top

Coding sequence (CDS) from alignment at AB540122:33..1537+

>AB540122.1-S34-RNase.m1 ID=AB540122.1-S34-RNase.m1; Name=S34-RNase; organism=Malus x domestica; type=CDS; length=699bp; location=Sequence derived from: AB540122:33..1537+ (Malus x domestica
atggggattacgaggatgatatatgtggttacgatggtattttcattaat
tgcattaatattgtcttcgtccncgatgggatacgattattttcaattta
cgcagcaatatcagccggcagtctgcaactctaatcctactccttgtaag
gatcctactgagaaattgtttacggttcacggtttgtggccttcaaactc
taatggacctgacccggtaaactgcaagccaaaaaccaaggtgcctcagg
cgcagcagccgatagatgcatcactcaaaccccagttggaaattatttgg
ccgaacgtactcaatcgagccgataatgaaagcttctggaataaacagtg
ggacaaacatggcacctgtgggtatcccacaataaaagacaagaaccatt
actttcaaacagtaatcaaaatgtacataacccagaaacaaaacgtttct
caaatcctatccaaagccaacatcaatccagacggtataggcaggacacg
gaagctaatcgaaagtgccatacgcaatggtaccaacgataaggaaccaa
aactcaagtgccaaaagaataatgggactattgaattagttgaggtcagt
ctttgcagcaattacctcggaaaacatttcataaattgccccaacaaaat
tccagaaggctcacgatatttctgccccatcaaagatatccggtattaa
back to top