PPO1, HM063947.1-PPO1.m1 (mRNA) Fragaria pentaphylla

Transcript Overview


Name	PPO1
Unique Name	HM063947.1-PPO1.m1
Type	mRNA
Organism	Fragaria pentaphylla ()
Source	genbank
Product	polyphenol oxidase 1

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
PPO1	HM063947.1-PPO1	Fragaria pentaphylla	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
HM063947.1-PPO1.m1-cds1	HM063947.1-PPO1.m1-cds1	Fragaria pentaphylla	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
PPO1	HM063947.1-PPO1.p1	Fragaria pentaphylla	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	297515600
nuccore	HM063947.1

Alignments

Feature Name	Type	Location	Analysis
HM063947	region	HM063947:973..2796+	NCBI Rosaceae gene and mRNA sequences

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HM063947:973..2796+
coding sequence from alignment at HM063947:973..2796+

mRNA sequence

>HM063947.1-PPO1.m1 ID=HM063947.1-PPO1.m1; Name=PPO1; organism=Fragaria pentaphylla; type=mRNA; length=1824bp
atggcttctctgtcaccctcagcagtaatggctactacaagcaccattcc
cggtactacaacttctttgtcttccttctctcacaagaattcccagattt
ccttaattcagaaacctaagcattcctacgcatggagcagagtctcatgc
aaagccacaaacagtgaccaaaacccttccaacaactccaacgatgcaca
acctcttggcagaaccctagaccggagaaatgtacttctcggtctcggag
gcctgtacggagtggccggtctcggcaccgacccttttgcctttgccaag
cctgttgctcctcctgacgtctccaaatgtggagccgcagacttgcctac
aggtgcgcaaaaaactgattgttgcccgccggtagcccaaaagatattcg
atttccagctcccacctcagtctaaactccgcgtcaggccagcggctcac
gctgttgacaaagcctacatcgagaaatactccaaggccatcgagctcat
gaaagctctccctgacgatgatccacgcagcttcaagcaacaagcaaaca
ttcactgtgcttattgtgacggagcttacgaccaagctggctttcctgat
cttgagctccaaatccacgactcgtggctattctttcccttccaccgata
ctacttgtacttctatgagagaatcctgggaaaattgatcaacgacccgt
cgttcgcctcgcctttctggaactgggatgctccggctggcatgcaactc
ccaggcatgtttgccaatcctaagtcgccgctctacgacaagttccgaaa
cgccaaccatcagccgccgaagctcattgatctcaattacaatctcaagg
atgcaaacgtctctgacgaaactcaaatcaacaccaacctcaagatcatg
tacaggcaaatggtgtccaacgccaagaaccctaagctgttctttggaaa
cccttatagggctggggacgagcctagccccggaggcggagcaatagaga
ctactccacatggaccggtccacatttggaccggtgacaacacacagccg
aatcttgaggacatgggaaacttctactctgccggtagagaccctatatt
tttttctcatcactctaacgttgaccgtttgtggagtgtgtggaaaaccc
taggaggcaagagagaggatttcaccgactctgattggttggattcgggg
tttttgttctatgacgagaacgcaaatatggtgcgggtgaaggtacgaga
ctgccttgattccaagaagctagggtatgtgtatcaagacgtggacattc
catggttgacgtccaagccaacaccgcgtaggtcgaagcttgcgaaagca
gctaaggcaattggggtggcgcgtgcagcgtcgtccggaccaaaggtcgt
agggagaagcgattttcccataaagttggactcgaagattagtacggtgg
taaagagaccgaagcagaagaagaggagcaagaaggagaaggaggacgag
gaggagatactagtgatcggagggatcgaattcgagaaagacatggcagt
gaagtttgatgtgtacgtgaatgacttggaagacgatgatgagccgggga
agcccgacgacagtgagtttgcggggagctttgtgaacgtgccccacaag
cataaggacaagaagaagaagaagaccaagagttgcctgaggttgggatt
aacggacttgctggaggatttgggggctgaagatgatgagagtgtggtgg
tgactttggtgccgaggtatgggactaagtctctcaagattgacactatc
aaaattgagtttcttgctgattga

protein sequence of PPO1

>HM063947.1-PPO1.p1 ID=HM063947.1-PPO1.p1; Name=PPO1; organism=Fragaria pentaphylla; type=polypeptide; length=607bp
MASLSPSAVMATTSTIPGTTTSLSSFSHKNSQISLIQKPKHSYAWSRVSC
KATNSDQNPSNNSNDAQPLGRTLDRRNVLLGLGGLYGVAGLGTDPFAFAK
PVAPPDVSKCGAADLPTGAQKTDCCPPVAQKIFDFQLPPQSKLRVRPAAH
AVDKAYIEKYSKAIELMKALPDDDPRSFKQQANIHCAYCDGAYDQAGFPD
LELQIHDSWLFFPFHRYYLYFYERILGKLINDPSFASPFWNWDAPAGMQL
PGMFANPKSPLYDKFRNANHQPPKLIDLNYNLKDANVSDETQINTNLKIM
YRQMVSNAKNPKLFFGNPYRAGDEPSPGGGAIETTPHGPVHIWTGDNTQP
NLEDMGNFYSAGRDPIFFSHHSNVDRLWSVWKTLGGKREDFTDSDWLDSG
FLFYDENANMVRVKVRDCLDSKKLGYVYQDVDIPWLTSKPTPRRSKLAKA
AKAIGVARAASSGPKVVGRSDFPIKLDSKISTVVKRPKQKKRSKKEKEDE
EEILVIGGIEFEKDMAVKFDVYVNDLEDDDEPGKPDDSEFAGSFVNVPHK
HKDKKKKKTKSCLRLGLTDLLEDLGAEDDESVVVTLVPRYGTKSLKIDTI
KIEFLAD

mRNA from alignment at HM063947:973..2796+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>HM063947.1-PPO1.m1 ID=HM063947.1-PPO1.m1; Name=PPO1; organism=Fragaria pentaphylla; type=mRNA; length=1824bp; location=Sequence derived from: HM063947:973..2796+ (Fragaria pentaphylla
atggcttctctgtcaccctcagcagtaatggctactacaagcaccattcc
cggtactacaacttctttgtcttccttctctcacaagaattcccagattt
ccttaattcagaaacctaagcattcctacgcatggagcagagtctcatgc
aaagccacaaacagtgaccaaaacccttccaacaactccaacgatgcaca
acctcttggcagaaccctagaccggagaaatgtacttctcggtctcggag
gcctgtacggagtggccggtctcggcaccgacccttttgcctttgccaag
cctgttgctcctcctgacgtctccaaatgtggagccgcagacttgcctac
aggtgcgcaaaaaactgattgttgcccgccggtagcccaaaagatattcg
atttccagctcccacctcagtctaaactccgcgtcaggccagcggctcac
gctgttgacaaagcctacatcgagaaatactccaaggccatcgagctcat
gaaagctctccctgacgatgatccacgcagcttcaagcaacaagcaaaca
ttcactgtgcttattgtgacggagcttacgaccaagctggctttcctgat
cttgagctccaaatccacgactcgtggctattctttcccttccaccgata
ctacttgtacttctatgagagaatcctgggaaaattgatcaacgacccgt
cgttcgcctcgcctttctggaactgggatgctccggctggcatgcaactc
ccaggcatgtttgccaatcctaagtcgccgctctacgacaagttccgaaa
cgccaaccatcagccgccgaagctcattgatctcaattacaatctcaagg
atgcaaacgtctctgacgaaactcaaatcaacaccaacctcaagatcatg
tacaggcaaatggtgtccaacgccaagaaccctaagctgttctttggaaa
cccttatagggctggggacgagcctagccccggaggcggagcaatagaga
ctactccacatggaccggtccacatttggaccggtgacaacacacagccg
aatcttgaggacatgggaaacttctactctgccggtagagaccctatatt
tttttctcatcactctaacgttgaccgtttgtggagtgtgtggaaaaccc
taggaggcaagagagaggatttcaccgactctgattggttggattcgggg
tttttgttctatgacgagaacgcaaatatggtgcgggtgaaggtacgaga
ctgccttgattccaagaagctagggtatgtgtatcaagacgtggacattc
catggttgacgtccaagccaacaccgcgtaggtcgaagcttgcgaaagca
gctaaggcaattggggtggcgcgtgcagcgtcgtccggaccaaaggtcgt
agggagaagcgattttcccataaagttggactcgaagattagtacggtgg
taaagagaccgaagcagaagaagaggagcaagaaggagaaggaggacgag
gaggagatactagtgatcggagggatcgaattcgagaaagacatggcagt
gaagtttgatgtgtacgtgaatgacttggaagacgatgatgagccgggga
agcccgacgacagtgagtttgcggggagctttgtgaacgtgccccacaag
cataaggacaagaagaagaagaagaccaagagttgcctgaggttgggatt
aacggacttgctggaggatttgggggctgaagatgatgagagtgtggtgg
tgactttggtgccgaggtatgggactaagtctctcaagattgacactatc
aaaattgagtttcttgctgattga

Coding sequence (CDS) from alignment at HM063947:973..2796+

>HM063947.1-PPO1.m1 ID=HM063947.1-PPO1.m1; Name=PPO1; organism=Fragaria pentaphylla; type=CDS; length=1824bp; location=Sequence derived from: HM063947:973..2796+ (Fragaria pentaphylla
atggcttctctgtcaccctcagcagtaatggctactacaagcaccattcc
cggtactacaacttctttgtcttccttctctcacaagaattcccagattt
ccttaattcagaaacctaagcattcctacgcatggagcagagtctcatgc
aaagccacaaacagtgaccaaaacccttccaacaactccaacgatgcaca
acctcttggcagaaccctagaccggagaaatgtacttctcggtctcggag
gcctgtacggagtggccggtctcggcaccgacccttttgcctttgccaag
cctgttgctcctcctgacgtctccaaatgtggagccgcagacttgcctac
aggtgcgcaaaaaactgattgttgcccgccggtagcccaaaagatattcg
atttccagctcccacctcagtctaaactccgcgtcaggccagcggctcac
gctgttgacaaagcctacatcgagaaatactccaaggccatcgagctcat
gaaagctctccctgacgatgatccacgcagcttcaagcaacaagcaaaca
ttcactgtgcttattgtgacggagcttacgaccaagctggctttcctgat
cttgagctccaaatccacgactcgtggctattctttcccttccaccgata
ctacttgtacttctatgagagaatcctgggaaaattgatcaacgacccgt
cgttcgcctcgcctttctggaactgggatgctccggctggcatgcaactc
ccaggcatgtttgccaatcctaagtcgccgctctacgacaagttccgaaa
cgccaaccatcagccgccgaagctcattgatctcaattacaatctcaagg
atgcaaacgtctctgacgaaactcaaatcaacaccaacctcaagatcatg
tacaggcaaatggtgtccaacgccaagaaccctaagctgttctttggaaa
cccttatagggctggggacgagcctagccccggaggcggagcaatagaga
ctactccacatggaccggtccacatttggaccggtgacaacacacagccg
aatcttgaggacatgggaaacttctactctgccggtagagaccctatatt
tttttctcatcactctaacgttgaccgtttgtggagtgtgtggaaaaccc
taggaggcaagagagaggatttcaccgactctgattggttggattcgggg
tttttgttctatgacgagaacgcaaatatggtgcgggtgaaggtacgaga
ctgccttgattccaagaagctagggtatgtgtatcaagacgtggacattc
catggttgacgtccaagccaacaccgcgtaggtcgaagcttgcgaaagca
gctaaggcaattggggtggcgcgtgcagcgtcgtccggaccaaaggtcgt
agggagaagcgattttcccataaagttggactcgaagattagtacggtgg
taaagagaccgaagcagaagaagaggagcaagaaggagaaggaggacgag
gaggagatactagtgatcggagggatcgaattcgagaaagacatggcagt
gaagtttgatgtgtacgtgaatgacttggaagacgatgatgagccgggga
agcccgacgacagtgagtttgcggggagctttgtgaacgtgccccacaag
cataaggacaagaagaagaagaagaccaagagttgcctgaggttgggatt
aacggacttgctggaggatttgggggctgaagatgatgagagtgtggtgg
tgactttggtgccgaggtatgggactaagtctctcaagattgacactatc
aaaattgagtttcttgctgattga